Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.1485
Ube2e3
ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
2
22193
Mm.1485
4930401B11Rik
RIKEN cDNA 4930401B11 gene
2
73823
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 67 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTCACTTTC (
4
)
99.5
0.0995
P8 Cb GC
CTCCTGAAGG
(
3
)
37.5
0.0375
P8 Cb GC
CCTACCTGCA (
5
)
3.3
0.0033
Cb medulloblastoma
GTTCACTTTC (
4
)
99.4
0.0994
Cb medulloblastoma
CTCCTGAAGG
(
3
)
25.4
0.0254
Cb medulloblastoma
CCTACCTGCA (
5
)
6.9
0.0069
P8 GC+1d culture
GTTCACTTTC (
4
)
47.9
0.0479
P8 GC+1d culture
CTCCTGAAGG
(
3
)
27.4
0.0274
P8 GC+1d culture
CCTACCTGCA (
5
)
3.4
0.0034
P8 GC+1d culture
CTGTTGTGAA
(
4
)
2.3
0.0023
P8 GC+1d culture
AACCACATAC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTCACTTTC (
4
)
83.1
0.0831
P8 GC+SHH+1d culture
CTCCTGAAGG
(
3
)
31.6
0.0316
P8 GC+SHH+1d culture
CCTACCTGCA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGTTGTGAA
(
4
)
1.2
0.0012
3T3 fibroblasts
GTTCACTTTC (
4
)
10.5
0.0105
3T3 fibroblasts
CCTACCTGCA (
5
)
7
0.007
E15 cortex
GTTCACTTTC (
4
)
9.9
0.0099
P1 cortex
CTCCTGAAGG
(
3
)
13.6
0.0136
P1 cortex
GTTCACTTTC (
4
)
9.1
0.0091
P1 cortex
CCTACCTGCA (
5
)
4.5
0.0045
P1 cortex
TTTATTGTGT (
4
)
4.5
0.0045
Hypothalamus
GTTCACTTTC (
4
)
81.5
0.0815
Hypothalamus
CTCCTGAAGG
(
3
)
9.1
0.0091
Hypothalamus
CCTACCTGCA (
5
)
1.8
0.0018
E12.5 retina
GTTCACTTTC (
4
)
73.2
0.0732
E12.5 retina
CTCCTGAAGG
(
3
)
31.9
0.0319
E12.5 retina
CCTACCTGCA (
5
)
7.5
0.0075
E14.5 retina
GTTCACTTTC (
4
)
78.3
0.0783
E14.5 retina
CTCCTGAAGG
(
3
)
32.8
0.0328
E14.5 retina
CCTACCTGCA (
5
)
5.5
0.0055
E16.5 retina
GTTCACTTTC (
4
)
74.3
0.0743
E16.5 retina
CTCCTGAAGG
(
3
)
25.4
0.0254
E16.5 retina
CCTACCTGCA (
5
)
3.6
0.0036
E16.5 retina
CTGTTGTGAA
(
4
)
3.6
0.0036
E16.5 retina
AACCACATAC
(
2
)
1.8
0.0018
E18.5 retina
GTTCACTTTC (
4
)
180.1
0.1801
E18.5 retina
CTCCTGAAGG
(
3
)
43.7
0.0437
E18.5 retina
CCTACCTGCA (
5
)
3.6
0.0036
E18.5 retina
TTTATTGTGT (
4
)
3.6
0.0036
P0.5 retina
GTTCACTTTC (
4
)
45.1
0.0451
P0.5 retina
CTCCTGAAGG
(
3
)
37.3
0.0373
P0.5 retina
CCTACCTGCA (
5
)
5.9
0.0059
P2.5 retina
GTTCACTTTC (
4
)
61.6
0.0616
P2.5 retina
CTCCTGAAGG
(
3
)
42.2
0.0422
P2.5 retina
AACCACATAC
(
2
)
1.8
0.0018
P4.5 retina
GTTCACTTTC (
4
)
67.4
0.0674
P4.5 retina
CTCCTGAAGG
(
3
)
59.4
0.0594
P4.5 retina
CCTACCTGCA (
5
)
2
0.002
P6.5 retina
CTCCTGAAGG
(
3
)
50
0.05
P6.5 retina
GTTCACTTTC (
4
)
45
0.045
P6.5 retina
AACCACATAC
(
2
)
3.3
0.0033
P6.5 retina
CCTACCTGCA (
5
)
1.7
0.0017
P10.5 crx- retina
GTTCACTTTC (
4
)
68.7
0.0687
P10.5 crx- retina
CTCCTGAAGG
(
3
)
29.7
0.0297
P10.5 crx- retina
AACCACATAC
(
2
)
5.6
0.0056
P10.5 crx- retina
CCTACCTGCA (
5
)
3.7
0.0037
P10.5 crx- retina
CTGTTGTGAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTTCACTTTC (
4
)
100
0.1
P10.5 crx+ retina
CTCCTGAAGG
(
3
)
40.4
0.0404
P10.5 crx+ retina
CCTACCTGCA (
5
)
1.9
0.0019
Adult retinal
GTTCACTTTC (
4
)
25.9
0.0259
Adult retinal
CTCCTGAAGG
(
3
)
16.7
0.0167
Adult retinal
CCTACCTGCA (
5
)
3.7
0.0037
Adult retinal
CTGTTGTGAA
(
4
)
1.9
0.0019
ONL
GTTCACTTTC (
4
)
26.8
0.0268
ONL
CTCCTGAAGG
(
3
)
9.6
0.0096
