Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.148781
Ranbp9
RAN binding protein 9
13
56705
Mm.148781
BB124184
expressed sequence BB124184
13
105405
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCTATGTAG (
3
)
1.6
0.0016
P8 Cb GC
GGACAGGCCA (
5
)
1.6
0.0016
P8 Cb GC
TCAACAGTGT
(
3
)
1.6
0.0016
Cb medulloblastoma
TCAACAGTGT
(
3
)
9.2
0.0092
Cb medulloblastoma
TGAACCAGCC
(
2
)
6.9
0.0069
P8 GC+1d culture
TCAACAGTGT
(
3
)
5.7
0.0057
P8 GC+1d culture
ATCCAAAAAA
(
6
)
2.3
0.0023
P8 GC+1d culture
GGACAGGCCA (
5
)
2.3
0.0023
P8 GC+1d culture
CTGTAAACTA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAACAGTGT
(
3
)
11.7
0.0117
P8 GC+SHH+1d culture
GGACAGGCCA (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
ATCCAAAAAA
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
TTAACTGTTT (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTTGTAGCT (
3
)
1.2
0.0012
3T3 fibroblasts
TCAACAGTGT
(
3
)
7
0.007
3T3 fibroblasts
GCTTGTAGCT (
3
)
3.5
0.0035
3T3 fibroblasts
GGACAGGCCA (
5
)
3.5
0.0035
E15 cortex
GGACAGGCCA (
5
)
4.9
0.0049
P1 cortex
ACCTATGTAG (
3
)
4.5
0.0045
P1 cortex
TCAACAGTGT
(
3
)
4.5
0.0045
Hypothalamus
TGGGTGATGG (
7
)
5.4
0.0054
Hypothalamus
ATCCAAAAAA
(
6
)
1.8
0.0018
Hypothalamus
GGACAGGCCA (
5
)
1.8
0.0018
Hypothalamus
TGAACCAGCC
(
2
)
1.8
0.0018
E12.5 retina
TCAACAGTGT
(
3
)
11.3
0.0113
E12.5 retina
CTGTAAACTA
(
3
)
3.8
0.0038
E12.5 retina
ATCCAAAAAA
(
6
)
1.9
0.0019
E12.5 retina
GGACAGGCCA (
5
)
1.9
0.0019
E12.5 retina
TTAACTGTTT (
3
)
1.9
0.0019
E14.5 retina
TCAACAGTGT
(
3
)
3.6
0.0036
E14.5 retina
GGACAGGCCA (
5
)
1.8
0.0018
E16.5 retina
GGACAGGCCA (
5
)
3.6
0.0036
E16.5 retina
TCAACAGTGT
(
3
)
3.6
0.0036
E18.5 retina
TCAACAGTGT
(
3
)
9.1
0.0091
E18.5 retina
ATCCAAAAAA
(
6
)
1.8
0.0018
E18.5 retina
GGACAGGCCA (
5
)
1.8
0.0018
E18.5 retina
TGGGTGATGG (
7
)
1.8
0.0018
E18.5 retina
TTAACTGTTT (
3
)
1.8
0.0018
P0.5 retina
TCAACAGTGT
(
3
)
3.9
0.0039
P0.5 retina
GGACAGGCCA (
5
)
2
0.002
P0.5 retina
TGAACCAGCC
(
2
)
2
0.002
P2.5 retina
TCAACAGTGT
(
3
)
10.6
0.0106
P2.5 retina
ATCCAAAAAA
(
6
)
3.5
0.0035
P2.5 retina
GGACAGGCCA (
5
)
3.5
0.0035
P2.5 retina
TGGGTGATGG (
7
)
1.8
0.0018
P4.5 retina
GGACAGGCCA (
5
)
4
0.004
P4.5 retina
TCAACAGTGT
(
3
)
4
0.004
P4.5 retina
ATCCAAAAAA
(
6
)
2
0.002
P4.5 retina
CTGTAAACTA
(
3
)
2
0.002
P4.5 retina
TGAACCAGCC
(
2
)
2
0.002
P4.5 retina
TGGGTGATGG (
7
)
2
0.002
P6.5 retina
TCAACAGTGT
(
3
)
8.3
0.0083
P6.5 retina
ACCTATGTAG (
3
)
1.7
0.0017
P6.5 retina
GGACAGGCCA (
5
)
1.7
0.0017
P10.5 crx- retina
TCAACAGTGT
(
3
)
7.4
0.0074
P10.5 crx- retina
CTGTAAACTA
(
3
)
1.9
0.0019
P10.5 crx- retina
GGACAGGCCA (
5
)
1.9
0.0019
P10.5 crx- retina
TGGGTGATGG (
7
)
1.9
0.0019
P10.5 crx+ retina
TCAACAGTGT
(
3
)
9.6
0.0096
P10.5 crx+ retina
GGACAGGCCA (
5
)
1.9
0.0019
Adult retinal
GGACAGGCCA (
5
)
3.7
0.0037
Adult retinal
TCAACAGTGT
(
3
)
3.7
0.0037
Adult retinal
TGAACCAGCC
(
2
)
3.7
0.0037
Adult retinal
TGGGTGATGG (
7
)
1.9
0.0019
ONL
TCAACAGTGT
(
3
)
5.7
0.0057
ONL
TTAACTGTTT (
3
)
1.9
0.0019
