Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.149954
Hip1r
huntingtin interacting protein 1 related
5
29816
Mm.149954
C77623
expressed sequence C77623
5
97221
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCAGCTGGA (
3
)
4.9
0.0049
P8 Cb GC
GAGGGCTGGC
(
3
)
3.3
0.0033
P8 Cb GC
GACCAAGGTC
(
2
)
1.6
0.0016
Cb medulloblastoma
GACCAAGGTC
(
2
)
9.2
0.0092
Cb medulloblastoma
AGGGAGAAGG (
5
)
2.3
0.0023
P8 GC+1d culture
GACCAAGGTC
(
2
)
9.1
0.0091
P8 GC+1d culture
AGCAGCTGGA (
3
)
2.3
0.0023
P8 GC+1d culture
AAGGATGACA
(
7
)
1.1
0.0011
P8 GC+1d culture
GAGGGCTGGC
(
3
)
1.1
0.0011
P8 GC+1d culture
GTGGACAAGG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GACCAAGGTC
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
AGCAGCTGGA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGGCTGGC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GATGCCCTAG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGACAAGG (
6
)
1.2
0.0012
3T3 fibroblasts
AGCAGCTGGA (
3
)
3.5
0.0035
E15 cortex
GTGGACAAGG (
6
)
4.9
0.0049
P1 cortex
GATGCCCTAG
(
2
)
9.1
0.0091
P1 cortex
AAGGATGACA
(
7
)
4.5
0.0045
P1 cortex
GACCAAGGTC
(
2
)
4.5
0.0045
E12.5 retina
AGCAGCTGGA (
3
)
7.5
0.0075
E12.5 retina
AAGGATGACA
(
7
)
1.9
0.0019
E12.5 retina
GACCAAGGTC
(
2
)
1.9
0.0019
E12.5 retina
GAGGGCTGGC
(
3
)
1.9
0.0019
E14.5 retina
AGCAGCTGGA (
3
)
3.6
0.0036
E14.5 retina
AAGGATGACA
(
7
)
1.8
0.0018
E14.5 retina
GACCAAGGTC
(
2
)
1.8
0.0018
E16.5 retina
AGCAGCTGGA (
3
)
5.4
0.0054
E16.5 retina
AAGGATGACA
(
7
)
1.8
0.0018
E18.5 retina
AGCAGCTGGA (
3
)
3.6
0.0036
E18.5 retina
AGGGAGAAGG (
5
)
1.8
0.0018
E18.5 retina
GACCAAGGTC
(
2
)
1.8
0.0018
P0.5 retina
AGCAGCTGGA (
3
)
9.8
0.0098
P0.5 retina
AAGGATGACA
(
7
)
3.9
0.0039
P2.5 retina
GACCAAGGTC
(
2
)
3.5
0.0035
P2.5 retina
AAGGATGACA
(
7
)
1.8
0.0018
P4.5 retina
AAGGATGACA
(
7
)
2
0.002
P4.5 retina
AGCAGCTGGA (
3
)
2
0.002
P4.5 retina
GAGGGCTGGC
(
3
)
2
0.002
P6.5 retina
AAGGATGACA
(
7
)
5
0.005
P6.5 retina
GACCAAGGTC
(
2
)
3.3
0.0033
P6.5 retina
AGGGAGAAGG (
5
)
1.7
0.0017
P6.5 retina
GAGGGCTGGC
(
3
)
1.7
0.0017
P10.5 crx- retina
AGCAGCTGGA (
3
)
1.9
0.0019
P10.5 crx- retina
AGGGAGAAGG (
5
)
1.9
0.0019
P10.5 crx+ retina
GACCAAGGTC
(
2
)
3.8
0.0038
Adult retinal
AAGGATGACA
(
7
)
5.6
0.0056
Adult retinal
AGCAGCTGGA (
3
)
5.6
0.0056
Adult retinal
GAGGGCTGGC
(
3
)
1.9
0.0019
ONL
AGCAGCTGGA (
3
)
1.9
0.0019
ONL
GACCAAGGTC
(
2
)
1.9
0.0019
