Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.150540
Ppp1r16b
protein phosphatase 1, regulatory (inhibitor) subunit 16B
2
228852
Mm.150540
C130078N17Rik
RIKEN cDNA C130078N17 gene
2
228853
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTCTGAATT (
8
)
4.9
0.0049
P8 Cb GC
TCACCAAGGG
(
4
)
1.6
0.0016
Cb medulloblastoma
TCACCAAGGG
(
4
)
25.4
0.0254
Cb medulloblastoma
ACTCTGAATT (
8
)
9.2
0.0092
P8 GC+1d culture
ACTCTGAATT (
8
)
8
0.008
P8 GC+1d culture
AGAATATTTT (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
ACTCTGAATT (
8
)
9.4
0.0094
P8 GC+SHH+1d culture
AGAATATTTT (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
AGGATAGATG (
4
)
1.2
0.0012
3T3 fibroblasts
TGTGTCAGCC
(
2
)
3.5
0.0035
P1 cortex
ACTCTGAATT (
8
)
4.5
0.0045
Hypothalamus
ACTCTGAATT (
8
)
5.4
0.0054
Hypothalamus
TCACCAAGGG
(
4
)
1.8
0.0018
E12.5 retina
ACTCTGAATT (
8
)
11.3
0.0113
E14.5 retina
ACTCTGAATT (
8
)
9.1
0.0091
E14.5 retina
AAAATATTTT
(
8
)
3.6
0.0036
E16.5 retina
ACTCTGAATT (
8
)
9.1
0.0091
E16.5 retina
TCACCAAGGG
(
4
)
1.8
0.0018
E18.5 retina
ACTCTGAATT (
8
)
7.3
0.0073
E18.5 retina
AAAATATTTT
(
8
)
1.8
0.0018
P0.5 retina
AGAATATTTT (
6
)
2
0.002
P2.5 retina
ACTCTGAATT (
8
)
1.8
0.0018
P2.5 retina
AGAATATTTT (
6
)
1.8
0.0018
P2.5 retina
TCACCAAGGG
(
4
)
1.8
0.0018
P4.5 retina
AAAATATTTT
(
8
)
2
0.002
P4.5 retina
ACTCTGAATT (
8
)
2
0.002
P4.5 retina
TGTGTCAGCC
(
2
)
2
0.002
P6.5 retina
ACTCTGAATT (
8
)
3.3
0.0033
P6.5 retina
TCACCAAGGG
(
4
)
3.3
0.0033
P6.5 retina
TGTGTCAGCC
(
2
)
1.7
0.0017
P10.5 crx+ retina
ACTCTGAATT (
8
)
3.8
0.0038
P10.5 crx+ retina
TCACCAAGGG
(
4
)
3.8
0.0038
P10.5 crx+ retina
AGGATAGATG (
4
)
1.9
0.0019
Adult retinal
ACTCTGAATT (
8
)
1.9
0.0019
Adult retinal
AGGATAGATG (
4
)
1.9
0.0019
Adult retinal
TCACCAAGGG
(
4
)
1.9
0.0019
ONL
AAAATATTTT
(
8
)
3.8
0.0038
ONL
TCACCAAGGG
(
4
)
1.9
0.0019
