Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15125	D9Ertd167e	DNA segment, Chr 9, ERATO Doi 167, expressed	9	9 33.0 cM	52212
Mm.15125	Sdfr1	stromal cell derived factor receptor 1	9		20320
Gene Ontology	extracellular space | integral to membrane | receptor activity
Human Homolog	SDFR1[stromal cell derived factor receptor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACTTGTGTT (6) 14.7 0.0147 P8 Cb GC TGCTTGTGTT (5) 3.3 0.0033 P8 Cb GC AAAAACAATC (5) 1.6 0.0016 P8 Cb GC CGCCATTTTT (3) 1.6 0.0016 Cb medulloblastoma TACTTGTGTT (6) 55.5 0.0555 Cb medulloblastoma TGTTTACAGA (4) 6.9 0.0069 Cb medulloblastoma CGCCATTTTT (3) 4.6 0.0046 Cb medulloblastoma AAATCAATGT (4) 2.3 0.0023 P8 GC+1d culture TACTTGTGTT (6) 18.3 0.0183 P8 GC+1d culture TGCTTGTGTT (5) 4.6 0.0046 P8 GC+1d culture TGCTGTGAGG (4) 2.3 0.0023 P8 GC+1d culture ACTGAGATAA (3) 1.1 0.0011 P8 GC+1d culture ATTTGACAAG (4) 1.1 0.0011 P8 GC+SHH+1d culture TACTTGTGTT (6) 9.4 0.0094 P8 GC+SHH+1d culture TGCTTGTGTT (5) 3.5 0.0035 P8 GC+SHH+1d culture ACTGAGATAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCTGTGAGG (4) 2.3 0.0023 P8 GC+SHH+1d culture AAATCAATGT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTGGAAC (3) 1.2 0.0012 3T3 fibroblasts TGCTGTGAGG (4) 21 0.021 3T3 fibroblasts TACTTGTGTT (6) 7 0.007 E15 cortex TACTTGTGTT (6) 4.9 0.0049 E15 cortex TGCTGTGAGG (4) 4.9 0.0049 P1 cortex TACTTGTGTT (6) 4.5 0.0045 P1 cortex TGCTGTGAGG (4) 4.5 0.0045 Hypothalamus TACTTGTGTT (6) 38 0.038 Hypothalamus AAATCAATGT (4) 1.8 0.0018 Hypothalamus ATTTGACAAG (4) 1.8 0.0018 Hypothalamus TGCTTGTGTT (5) 1.8 0.0018 Hypothalamus TGTTTACAGA (4) 1.8 0.0018 E12.5 retina ACTGAGATAA (3) 9.4 0.0094 E12.5 retina TACTTGTGTT (6) 5.6 0.0056 E12.5 retina TGCTGTGAGG (4) 3.8 0.0038 E12.5 retina AAAAACAATC (5) 1.9 0.0019 E12.5 retina TGCTTGTGTT (5) 1.9 0.0019 E14.5 retina ACTGAGATAA (3) 3.6 0.0036 E14.5 retina AAAAACAATC (5) 1.8 0.0018 E14.5 retina TATGCAACTA (6) 1.8 0.0018 E14.5 retina TGCTGTGAGG (4) 1.8 0.0018 E14.5 retina TGCTTGTGTT (5) 1.8 0.0018 E16.5 retina AAAAACAATC (5) 14.5 0.0145 E16.5 retina TACTTGTGTT (6) 7.2 0.0072 E16.5 retina TGCTTGTGTT (5) 5.4 0.0054 E16.5 retina ACTGAGATAA (3) 1.8 0.0018 E16.5 retina ATTTGACAAG (4) 1.8 0.0018 E18.5 retina TACTTGTGTT (6) 12.7 0.0127 E18.5 retina ACTGAGATAA (3) 3.6 0.0036 E18.5 retina AAAAACAATC (5) 1.8 0.0018 E18.5 retina TATGCAACTA (6) 1.8 0.0018 E18.5 retina TGCTTGTGTT (5) 1.8 0.0018 P0.5 retina TACTTGTGTT (6) 9.8 0.0098 P0.5 retina ACTGAGATAA (3) 5.9 0.0059 P0.5 retina AAAAACAATC (5) 2 0.002 P0.5 retina TGCTTGTGTT (5) 2 0.002 P2.5 retina TACTTGTGTT (6) 12.3 0.0123 P4.5 retina TACTTGTGTT (6) 11.9 0.0119 P4.5 retina ACTGAGATAA (3) 2 0.002 P6.5 retina TACTTGTGTT (6) 15 0.015 P6.5 retina ACTGAGATAA (3) 6.7 0.0067 P6.5 retina TGCTTGTGTT (5) 6.7 0.0067 P6.5 retina AAAAACAATC (5) 5 0.005 P6.5 retina ATTTGACAAG (4) 1.7 0.0017 P6.5 retina TGCTGTGAGG (4) 1.7 0.0017 P10.5 crx- retina TACTTGTGTT (6) 27.9 0.0279 P10.5 crx- retina TGCTGTGAGG (4) 7.4 0.0074 P10.5 crx- retina TGCTTGTGTT (5) 5.6 0.0056 P10.5 crx- retina AAAAACAATC (5) 1.9 0.0019 P10.5 crx+ retina TACTTGTGTT (6) 25 0.025 P10.5 crx+ retina TGCTGTGAGG (4) 9.6 0.0096 P10.5 crx+ retina ACTGAGATAA (3) 3.8 0.0038 P10.5 crx+ retina TATGCAACTA (6) 1.9 0.0019 Adult retinal TACTTGTGTT (6) 24.1 0.0241 Adult retinal ATTTGACAAG (4) 1.9 0.0019 Adult retinal TGCTTGTGTT (5) 1.9 0.0019 ONL TACTTGTGTT (6) 19.2 0.0192 ONL TGCTTGTGTT (5) 7.7 0.0077 ONL AAAAACAATC (5) 3.8 0.0038 ONL CGCCATTTTT (3) 1.9 0.0019 ONL TTTTTGGAAC (3) 1.9 0.0019