Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.151293	Nlgn2	neuroligin 2	11		216856
Human Homolog	NLGN2[neuroligin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCCACCCC (6) 9.8 0.0098 P8 Cb GC ACAGATGTCA 3.3 0.0033 P8 Cb GC CTCTGTCTGT (3) 1.6 0.0016 P8 Cb GC GACAGGCTGG (5) 1.6 0.0016 P8 Cb GC TGCAGGGTGA 1.6 0.0016 P8 Cb GC TGGTTGCTCT (3) 1.6 0.0016 Cb medulloblastoma CCCCCACCCC (6) 13.9 0.0139 Cb medulloblastoma CTCTGTCTGT (3) 9.2 0.0092 Cb medulloblastoma ACAGATGTCA 4.6 0.0046 Cb medulloblastoma TGCAGGGTGA 4.6 0.0046 Cb medulloblastoma CCTTCCAAAA (7) 2.3 0.0023 Cb medulloblastoma TGGTTGCTCT (3) 2.3 0.0023 P8 GC+1d culture CCCCCACCCC (6) 17.1 0.0171 P8 GC+1d culture ACAGATGTCA 3.4 0.0034 P8 GC+1d culture TGCAGGGTGA 3.4 0.0034 P8 GC+1d culture TGGGTCCTGG (7) 3.4 0.0034 P8 GC+1d culture CTCTGTCTGT (3) 1.1 0.0011 P8 GC+1d culture GTGGCGCACT (3) 1.1 0.0011 P8 GC+SHH+1d culture CCCCCACCCC (6) 8.2 0.0082 P8 GC+SHH+1d culture CTCTGTCTGT (3) 5.9 0.0059 P8 GC+SHH+1d culture TGCAGGGTGA 5.9 0.0059 P8 GC+SHH+1d culture ACAGATGTCA 3.5 0.0035 P8 GC+SHH+1d culture GTGGCGCACT (3) 1.2 0.0012 3T3 fibroblasts CCCCCACCCC (6) 10.5 0.0105 3T3 fibroblasts ACAGATGTCA 3.5 0.0035 3T3 fibroblasts CTCTGTCTGT (3) 3.5 0.0035 3T3 fibroblasts GTGGCGCACT (3) 3.5 0.0035 E15 cortex TGGGTCCTGG (7) 9.9 0.0099 E15 cortex ACAGATGTCA 4.9 0.0049 E15 cortex TGGTTGCTCT (3) 4.9 0.0049 P1 cortex CCCCCACCCC (6) 9.1 0.0091 P1 cortex ACAGATGTCA 4.5 0.0045 P1 cortex CTCTGTCTGT (3) 4.5 0.0045 P1 cortex TGGTTGCTCT (3) 4.5 0.0045 Hypothalamus CCCCCACCCC (6) 3.6 0.0036 Hypothalamus ACAGATGTCA 1.8 0.0018 Hypothalamus TGCAGGGTGA 1.8 0.0018 E12.5 retina ACAGATGTCA 9.4 0.0094 E12.5 retina CCCCCACCCC (6) 3.8 0.0038 E12.5 retina CTCTGTCTGT (3) 1.9 0.0019 E12.5 retina TGCAGGGTGA 1.9 0.0019 E12.5 retina TGGTTGCTCT (3) 1.9 0.0019 E14.5 retina CCCCCACCCC (6) 5.5 0.0055 E14.5 retina ACAGATGTCA 1.8 0.0018 E14.5 retina CACCACTATG (3) 1.8 0.0018 E14.5 retina GACAGGCTGG (5) 1.8 0.0018 E14.5 retina TGGTTGCTCT (3) 1.8 0.0018 E16.5 retina CCCCCACCCC (6) 5.4 0.0054 E16.5 retina TGGGTCCTGG (7) 3.6 0.0036 E16.5 retina ACAGATGTCA 1.8 0.0018 E16.5 retina CTCTGTCTGT (3) 1.8 0.0018 E16.5 retina GTGGCGCACT (3) 1.8 0.0018 E16.5 retina TGCAGGGTGA 1.8 0.0018 E16.5 retina TGGTTGCTCT (3) 1.8 0.0018 E18.5 retina ACAGATGTCA 1.8 0.0018 E18.5 retina CCCCCACCCC (6) 1.8 0.0018 P0.5 retina ACAGATGTCA 3.9 0.0039 P0.5 retina CACCACTATG (3) 3.9 0.0039 P0.5 retina CCCCCACCCC (6) 3.9 0.0039 P0.5 retina TGCAGGGTGA 2 0.002 P0.5 retina TGGTTGCTCT (3) 2 0.002 P2.5 retina CCCCCACCCC (6) 7 0.007 P2.5 retina CTCTGTCTGT (3) 3.5 0.0035 P2.5 retina ACAGATGTCA 1.8 0.0018 P2.5 retina CCTTCCAAAA (7) 1.8 0.0018 P2.5 retina GTGGCGCACT (3) 1.8 0.0018 P2.5 retina TGCAGGGTGA 1.8 0.0018 P4.5 retina CCCCCACCCC (6) 5.9 0.0059 P4.5 retina TGCAGGGTGA 4 0.004 P4.5 retina TGGGTCCTGG (7) 4 0.004 P4.5 retina TGGTTGCTCT (3) 4 0.004 P4.5 retina CCTTCCAAAA (7) 2 0.002 P4.5 retina CTCTGTCTGT (3) 2 0.002 P6.5 retina CCCCCACCCC (6) 11.7 0.0117 P6.5 retina ACAGATGTCA 3.3 0.0033 P6.5 retina CTCTGTCTGT (3) 1.7 0.0017 P6.5 retina TGCAGGGTGA 1.7 0.0017 P10.5 crx- retina CCCCCACCCC (6) 7.4 0.0074 P10.5 crx- retina CTCTGTCTGT (3) 3.7 0.0037 P10.5 crx- retina ACAGATGTCA 1.9 0.0019 P10.5 crx- retina GACAGGCTGG (5) 1.9 0.0019 P10.5 crx- retina GTGGCGCACT (3) 1.9 0.0019 P10.5 crx- retina TGGTTGCTCT (3) 1.9 0.0019 P10.5 crx+ retina CCCCCACCCC (6) 11.5 0.0115 P10.5 crx+ retina TGCAGGGTGA 5.8 0.0058 P10.5 crx+ retina ACAGATGTCA 1.9 0.0019 P10.5 crx+ retina TGGGTCCTGG (7) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTCT (3) 1.9 0.0019 Adult retinal CCCCCACCCC (6) 9.3 0.0093 Adult retinal CTCTGTCTGT (3) 1.9 0.0019 ONL TGGGTCCTGG (7) 5.7 0.0057 ONL CCCCCACCCC (6) 3.8 0.0038 ONL TGCAGGGTGA 3.8 0.0038 ONL ACAGATGTCA 1.9 0.0019