Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.153008
Agtpbp1
ATP/GTP binding protein 1
13
13 37.0 cM
67269
Mm.153008
A230056J06Rik
RIKEN cDNA A230056J06 gene
13
319469
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAACTGTGT
(
2
)
4.9
0.0049
P8 Cb GC
GATTTCTGCA (
4
)
1.6
0.0016
P8 Cb GC
GGCTGTGCAA (
4
)
1.6
0.0016
Cb medulloblastoma
TGAACTGTGT
(
2
)
11.6
0.0116
Cb medulloblastoma
GGCTGTGCAA (
4
)
4.6
0.0046
P8 GC+1d culture
TGAACTGTGT
(
2
)
6.8
0.0068
P8 GC+1d culture
GGCTGTGCAA (
4
)
4.6
0.0046
P8 GC+1d culture
GTCTGGCATT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGCTGTGCAA (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TGAACTGTGT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
ACTGGTGATT
(
4
)
1.2
0.0012
3T3 fibroblasts
GGCTGTGCAA (
4
)
3.5
0.0035
P1 cortex
GTGAAAATTG
(
4
)
9.1
0.0091
P1 cortex
TGAACTGTGT
(
2
)
4.5
0.0045
Hypothalamus
TGAACTGTGT
(
2
)
9.1
0.0091
E12.5 retina
GGCTGTGCAA (
4
)
1.9
0.0019
E12.5 retina
GTCTGGCATT
(
4
)
1.9
0.0019
E14.5 retina
TGAACTGTGT
(
2
)
3.6
0.0036
E16.5 retina
GGCTGTGCAA (
4
)
5.4
0.0054
E16.5 retina
TGAACTGTGT
(
2
)
3.6
0.0036
E16.5 retina
ACTGGTGATT
(
4
)
1.8
0.0018
E16.5 retina
TCTGAGAAGT (
4
)
1.8
0.0018
E18.5 retina
GGCTGTGCAA (
4
)
12.7
0.0127
E18.5 retina
TGAACTGTGT
(
2
)
9.1
0.0091
P0.5 retina
GGCTGTGCAA (
4
)
5.9
0.0059
P0.5 retina
TGAACTGTGT
(
2
)
3.9
0.0039
P2.5 retina
TGAACTGTGT
(
2
)
5.3
0.0053
P2.5 retina
TCTGAGAAGT (
4
)
3.5
0.0035
P2.5 retina
GGCTGTGCAA (
4
)
1.8
0.0018
P4.5 retina
GGCTGTGCAA (
4
)
4
0.004
P4.5 retina
TGAACTGTGT
(
2
)
4
0.004
P4.5 retina
GTGAAAATTG
(
4
)
2
0.002
P6.5 retina
TGAACTGTGT
(
2
)
13.3
0.0133
P6.5 retina
GGCTGTGCAA (
4
)
5
0.005
P6.5 retina
ACTGGTGATT
(
4
)
1.7
0.0017
P10.5 crx- retina
TGAACTGTGT
(
2
)
16.7
0.0167
P10.5 crx- retina
GGCTGTGCAA (
4
)
7.4
0.0074
P10.5 crx- retina
ACTGGTGATT
(
4
)
1.9
0.0019
P10.5 crx- retina
TCTGAGAAGT (
4
)
1.9
0.0019
P10.5 crx+ retina
GGCTGTGCAA (
4
)
9.6
0.0096
P10.5 crx+ retina
TGAACTGTGT
(
2
)
9.6
0.0096
P10.5 crx+ retina
ACTGGTGATT
(
4
)
3.8
0.0038
Adult retinal
TGAACTGTGT
(
2
)
5.6
0.0056
Adult retinal
GGCTGTGCAA (
4
)
3.7
0.0037
Adult retinal
GATTTCTGCA (
4
)
1.9
0.0019
Adult retinal
GTCTGGCATT
(
4
)
1.9
0.0019
ONL
TGAACTGTGT
(
2
)
3.8
0.0038
ONL
GATTTCTGCA (
4
)
1.9
0.0019
