Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.153159	Cct6a	chaperonin subunit 6a (zeta)	5		12466
Gene Ontology	ATP binding | protein folding
Human Homolog	CCT6A[chaperonin containing TCP1, subunit 6A (zeta 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAGATCCTT 34.3 0.0343 P8 Cb GC GAAGATGAAG (10) 4.9 0.0049 P8 Cb GC CGAGCTGGGA (3) 3.3 0.0033 P8 Cb GC GAGCTCGGCA (4) 3.3 0.0033 P8 Cb GC TTGTCTACCC (3) 3.3 0.0033 P8 Cb GC TTGTCTAAAA (5) 1.6 0.0016 P8 Cb GC TTTCTCCTCT (2) 1.6 0.0016 Cb medulloblastoma TAAGATCCTT 20.8 0.0208 Cb medulloblastoma TTGTCTAAAA (5) 2.3 0.0023 P8 GC+1d culture TAAGATCCTT 24 0.024 P8 GC+1d culture CAAGGGCTTG (2) 1.1 0.0011 P8 GC+1d culture CTTATCTTAT 1.1 0.0011 P8 GC+1d culture CTTATTTTAT (9) 1.1 0.0011 P8 GC+1d culture CTTTGATGAT (7) 1.1 0.0011 P8 GC+1d culture GAGCTCGGCA (4) 1.1 0.0011 P8 GC+1d culture GTGGGGGGAG (4) 1.1 0.0011 P8 GC+1d culture TTGTCTAAAA (5) 1.1 0.0011 P8 GC+SHH+1d culture TAAGATCCTT 25.8 0.0258 P8 GC+SHH+1d culture ATATCACTGG (2) 7 0.007 P8 GC+SHH+1d culture TTGTCTACCC (3) 3.5 0.0035 P8 GC+SHH+1d culture ACTGAAAGAA 2.3 0.0023 P8 GC+SHH+1d culture TTTCTCCTCT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAATGAAAAT (10) 1.2 0.0012 P8 GC+SHH+1d culture CAAGGGCTTG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTATTTTAT (9) 1.2 0.0012 P8 GC+SHH+1d culture CTTTGATGAT (7) 1.2 0.0012 P8 GC+SHH+1d culture TTGTCTAAAA (5) 1.2 0.0012 3T3 fibroblasts TAAGATCCTT 7 0.007 3T3 fibroblasts CTTATCTTAT 3.5 0.0035 E15 cortex TAAGATCCTT 9.9 0.0099 E15 cortex CCTGTAAGCC (3) 4.9 0.0049 E15 cortex GAGCTCGGCA (4) 4.9 0.0049 E15 cortex TTTCTCCTCT (2) 4.9 0.0049 P1 cortex TAAGATCCTT 13.6 0.0136 P1 cortex AAAGATCCTT (4) 4.5 0.0045 P1 cortex AAATGAAAAT (10) 4.5 0.0045 P1 cortex CCTGTAAGCC (3) 4.5 0.0045 P1 cortex CTTATTTTAT (9) 4.5 0.0045 P1 cortex TTGTCTAAAA (5) 4.5 0.0045 Hypothalamus TAAGATCCTT 9.1 0.0091 Hypothalamus CCTGTAAGCC (3) 1.8 0.0018 E12.5 retina TAAGATCCTT 43.2 0.0432 E12.5 retina ACTGAAAGAA 1.9 0.0019 E12.5 retina CAAGGGCTTG (2) 1.9 0.0019 E12.5 retina CTTATCTTAT 1.9 0.0019 E12.5 retina CTTTGATGAT (7) 1.9 0.0019 E14.5 retina TAAGATCCTT 20 0.02 E14.5 retina ACTGAAAGAA 10.9 0.0109 E14.5 retina TTGTCTAAAA (5) 1.8 0.0018 E14.5 retina TTGTCTACCC (3) 1.8 0.0018 E16.5 retina TAAGATCCTT 12.7 0.0127 E16.5 retina ACTGAAAGAA 7.2 0.0072 E16.5 retina CCTGTAAGCC (3) 3.6 0.0036 E16.5 retina CTTATTTTAT (9) 1.8 0.0018 E16.5 retina GTGGGGGGAG (4) 1.8 0.0018 E18.5 retina ACTGAAAGAA 20 0.02 E18.5 retina TAAGATCCTT 18.2 0.0182 E18.5 retina TTGTCTAAAA (5) 5.5 0.0055 E18.5 retina CCTGTAAGCC (3) 3.6 0.0036 E18.5 retina CTTTGATGAT (7) 3.6 0.0036 P0.5 retina TAAGATCCTT 17.7 0.0177 P0.5 retina ACTGAAAGAA 3.9 0.0039 P0.5 retina AAAGATCCTT (4) 2 0.002 P0.5 retina AAATGAAAAT (10) 2 0.002 P0.5 retina TTTCTCCTCT (2) 2 0.002 P2.5 retina TAAGATCCTT 26.4 0.0264 P2.5 retina ACTGAAAGAA 10.6 0.0106 P2.5 retina CCTGTAAGCC (3) 3.5 0.0035 P2.5 retina AAATGAAAAT (10) 1.8 0.0018 P2.5 retina CTTTGATGAT (7) 1.8 0.0018 P4.5 retina TAAGATCCTT 21.8 0.0218 P4.5 retina CCTGTAAGCC (3) 2 0.002 P4.5 retina CTTATTTTAT (9) 2 0.002 P4.5 retina CTTTGATGAT (7) 2 0.002 P6.5 retina TAAGATCCTT 30 0.03 P6.5 retina ACTGAAAGAA 6.7 0.0067 P6.5 retina AAATGAAAAT (10) 1.7 0.0017 P6.5 retina CCTGTAAGCC (3) 1.7 0.0017 P6.5 retina CGAGCTGGGA (3) 1.7 0.0017 P6.5 retina CTTATCTTAT 1.7 0.0017 P6.5 retina GTGGGGGGAG (4) 1.7 0.0017 P6.5 retina TTTCTCCTCT (2) 1.7 0.0017 P10.5 crx- retina TAAGATCCTT 7.4 0.0074 P10.5 crx- retina CCTGTAAGCC (3) 5.6 0.0056 P10.5 crx- retina GTGGGGGGAG (4) 1.9 0.0019 P10.5 crx+ retina TAAGATCCTT 21.1 0.0211 P10.5 crx+ retina CGAGCTGGGA (3) 9.6 0.0096 P10.5 crx+ retina CCTGTAAGCC (3) 7.7 0.0077 P10.5 crx+ retina ACTGAAAGAA 5.8 0.0058 P10.5 crx+ retina AGCATTCCTT (2) 1.9 0.0019 P10.5 crx+ retina CTTATCTTAT 1.9 0.0019 P10.5 crx+ retina GTGGGGGGAG (4) 1.9 0.0019 P10.5 crx+ retina TTGTCTACCC (3) 1.9 0.0019 Adult retinal TAAGATCCTT 13 0.013 Adult retinal AGCATTCCTT (2) 5.6 0.0056 Adult retinal CCTGTAAGCC (3) 5.6 0.0056 Adult retinal CGAGCTGGGA (3) 5.6 0.0056 ONL TAAGATCCTT 17.2 0.0172 ONL CGAGCTGGGA (3) 3.8 0.0038 ONL AAAGATCCTT (4) 1.9 0.0019 ONL AAATGAAAAT (10) 1.9 0.0019 ONL AGCATTCCTT (2) 1.9 0.0019 ONL GAGCTCGGCA (4) 1.9 0.0019