Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.154303
AI852220
expressed sequence AI852220
1
98465
Mm.154303
4930544G21Rik
RIKEN cDNA 4930544G21 gene
1
1 C5
77629
Human Homolog
SKIP[SPHK1 (sphingosine kinase type 1) interacting protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTTGTACCT
(
4
)
21.2
0.0212
P8 Cb GC
AACCTTCAGC (
3
)
1.6
0.0016
P8 Cb GC
GGGTAAGGAG
(
3
)
1.6
0.0016
Cb medulloblastoma
TGTTGTACCT
(
4
)
18.5
0.0185
Cb medulloblastoma
TACTAGCACA (
3
)
4.6
0.0046
P8 GC+1d culture
TGTTGTACCT
(
4
)
21.7
0.0217
P8 GC+1d culture
AACCTTCAGC (
3
)
2.3
0.0023
P8 GC+1d culture
GGGTAAGGAG
(
3
)
2.3
0.0023
P8 GC+1d culture
CCAGAGCCAG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTTGTACCT
(
4
)
11.7
0.0117
P8 GC+SHH+1d culture
AACCTTCAGC (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CCAGAGCCAG (
7
)
1.2
0.0012
3T3 fibroblasts
CCAGAGCCAG (
7
)
14
0.014
Hypothalamus
TGTTGTACCT
(
4
)
10.9
0.0109
Hypothalamus
AACCTTCAGC (
3
)
9.1
0.0091
Hypothalamus
CCAGAGCCAG (
7
)
1.8
0.0018
Hypothalamus
TACTAGCACA (
3
)
1.8
0.0018
E12.5 retina
AACCTTCAGC (
3
)
1.9
0.0019
E12.5 retina
TGTTGTACCT
(
4
)
1.9
0.0019
E14.5 retina
CCAGAGCCAG (
7
)
12.8
0.0128
E14.5 retina
AACCTTCAGC (
3
)
5.5
0.0055
E14.5 retina
TGTTGTACCT
(
4
)
1.8
0.0018
E16.5 retina
CCAGAGCCAG (
7
)
10.9
0.0109
E16.5 retina
TGTTGTACCT
(
4
)
5.4
0.0054
E16.5 retina
AACCTTCAGC (
3
)
3.6
0.0036
E18.5 retina
TGTTGTACCT
(
4
)
7.3
0.0073
E18.5 retina
AACCTTCAGC (
3
)
1.8
0.0018
P0.5 retina
TGTTGTACCT
(
4
)
7.9
0.0079
P0.5 retina
CCAGAGCCAG (
7
)
2
0.002
P2.5 retina
TGTTGTACCT
(
4
)
3.5
0.0035
P2.5 retina
AACCTTCAGC (
3
)
1.8
0.0018
P2.5 retina
CCAGAGCCAG (
7
)
1.8
0.0018
P2.5 retina
GGGTAAGGAG
(
3
)
1.8
0.0018
P4.5 retina
TGTTGTACCT
(
4
)
11.9
0.0119
P4.5 retina
AACCTTCAGC (
3
)
2
0.002
P6.5 retina
TGTTGTACCT
(
4
)
21.7
0.0217
P6.5 retina
GGGTAAGGAG
(
3
)
3.3
0.0033
P10.5 crx- retina
TGTTGTACCT
(
4
)
22.3
0.0223
P10.5 crx- retina
AACCTTCAGC (
3
)
3.7
0.0037
P10.5 crx- retina
GGGTAAGGAG
(
3
)
1.9
0.0019
P10.5 crx- retina
TTTCCCCAAA (
5
)
1.9
0.0019
P10.5 crx+ retina
TGTTGTACCT
(
4
)
26.9
0.0269
P10.5 crx+ retina
AACCTTCAGC (
3
)
1.9
0.0019
Adult retinal
TGTTGTACCT
(
4
)
7.4
0.0074
Adult retinal
TTTCCCCAAA (
5
)
3.7
0.0037
Adult retinal
GGGTAAGGAG
(
3
)
1.9
0.0019
ONL
TGTTGTACCT
(
4
)
3.8
0.0038
ONL
TTTCCCCAAA (
5
)
1.9
0.0019
