Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.154306	4930550B20Rik	RIKEN cDNA 4930550B20 gene	4		77593
Gene Ontology	hydrolase activity
Human Homolog	USP45[ubiquitin specific protease 45]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TGAAGAAAGC (3) 3.3 0.0033 P8 Cb GC CAGAAAAATA (5) 1.6 0.0016 P8 Cb GC CAGAAATCAT (4) 1.6 0.0016 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GTATCATTCC (2) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma ACAGAAAACA (7) 2.3 0.0023 Cb medulloblastoma CTTTTAAAAA (10) 2.3 0.0023 Cb medulloblastoma GTATCATTCC (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CTTTTAAAAA (10) 4.6 0.0046 P8 GC+1d culture CAGAAAAATA (5) 2.3 0.0023 P8 GC+1d culture CAGAAATCAT (4) 2.3 0.0023 P8 GC+1d culture GCACAGGCAG (7) 1.1 0.0011 P8 GC+1d culture GTATCATTCC (2) 1.1 0.0011 P8 GC+1d culture TGAAGAAAGC (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture GTATCATTCC (2) 7 0.007 P8 GC+SHH+1d culture CTTTTAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture CAGAAAAATA (5) 2.3 0.0023 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts TGAAGAAAGC (3) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CTTTTAAAAA (10) 4.9 0.0049 E15 cortex TGAAGAAAGC (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex GTATCATTCC (2) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CAAGCTAAGA (2) 3.6 0.0036 Hypothalamus ACAGAAAACA (7) 1.8 0.0018 Hypothalamus CTTTTAAAAA (10) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina CTTTTAAAAA (10) 3.8 0.0038 E12.5 retina GTATCATTCC (2) 3.8 0.0038 E12.5 retina CAAGCTAAGA (2) 1.9 0.0019 E12.5 retina CAGAAAAATA (5) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina CTTTTAAAAA (10) 7.3 0.0073 E14.5 retina GTATCATTCC (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina CTTTTAAAAA (10) 3.6 0.0036 E16.5 retina CAGAAAAATA (5) 1.8 0.0018 E16.5 retina GTATCATTCC (2) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CTTTTAAAAA (10) 5.5 0.0055 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina GTATCATTCC (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina CAAGCTAAGA (2) 2 0.002 P0.5 retina CAGAAAAATA (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CTTTTAAAAA (10) 7 0.007 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina GTATCATTCC (2) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CTTTTAAAAA (10) 5.9 0.0059 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina CAAGCTAAGA (2) 2 0.002 P4.5 retina CAGAAAAATA (5) 2 0.002 P4.5 retina GTATCATTCC (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CTTTTAAAAA (10) 6.7 0.0067 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina GTATCATTCC (2) 5 0.005 P6.5 retina GCACAGGCAG (7) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina CTTTTAAAAA (10) 1.9 0.0019 P10.5 crx- retina GTATCATTCC (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina ACAGAAAACA (7) 1.9 0.0019 P10.5 crx+ retina CAGAAAAATA (5) 1.9 0.0019 P10.5 crx+ retina CTTTTAAAAA (10) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal GCACAGGCAG (7) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CCTTTAATTC (36) 3.8 0.0038 ONL CTTTTAAAAA (10) 1.9 0.0019