Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.154457	Tapbp	TAP binding protein	17	17 B1 (17 18.41 cM)	21356
Gene Ontology	defense response | endoplasmic reticulum | integral to membrane | integral to plasma membrane | microsome
Human Homolog	TAPBP[TAP binding protein (tapasin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 19 In Situ Hybridization Images

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SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC TCGGAAGAGA (5) 1.6 0.0016 Cb medulloblastoma TCGGAAGAGA (5) 2.3 0.0023 P8 GC+1d culture TGTCTCCCTC 5.7 0.0057 P8 GC+SHH+1d culture TGTCTCCCTC 4.7 0.0047 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGTCTCCCTC 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 Hypothalamus TGTCTCCCTC 1.8 0.0018 E12.5 retina TGTCTCCCTC 1.9 0.0019 E14.5 retina TCGGAAGAGA (5) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina TCGGAAGAGA (5) 1.8 0.0018 E16.5 retina TGTCTCCCTC 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx+ retina TGTCTCCCTC 3.8 0.0038 P10.5 crx+ retina TCGGAAGAGA (5) 1.9 0.0019 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TGTCTCCCTC 1.9 0.0019 ONL TGTCTCCCTC 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ATTCCGAATT (107) 3.8 0.0038