Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.154915	Rps29	ribosomal protein S29	2		20090
Gene Ontology	cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | regulation of cell shape | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome | zinc ion binding
Human Homolog	RPS29[ribosomal protein S29]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAGTCTTTG 327.9 0.3279 P8 Cb GC TTAGTCTTTG (2) 6.5 0.0065 P8 Cb GC TTCAGCCCGT 3.3 0.0033 P8 Cb GC ATCGGTTCCA (2) 1.6 0.0016 Cb medulloblastoma CTAGTCTTTG 122.6 0.1226 Cb medulloblastoma CTATTCTTTG 2.3 0.0023 Cb medulloblastoma TTAGTCTTTG (2) 2.3 0.0023 Cb medulloblastoma TTCAGCCCGT 2.3 0.0023 P8 GC+1d culture CTAGTCTTTG 230.6 0.2306 P8 GC+1d culture TGCCGCCAGT 3.4 0.0034 P8 GC+1d culture ATCGGTTCCA (2) 2.3 0.0023 P8 GC+1d culture GGGTTTTCCC (4) 2.3 0.0023 P8 GC+1d culture TTAGTCTTTG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTAGTCTTTG 296.2 0.2962 P8 GC+SHH+1d culture GGGTTTTCCC (4) 4.7 0.0047 P8 GC+SHH+1d culture ATCGGTTCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCCGCCAGT 1.2 0.0012 P8 GC+SHH+1d culture TTAGTCTTTG (2) 1.2 0.0012 3T3 fibroblasts CTAGTCTTTG 56.1 0.0561 3T3 fibroblasts GGGTTTTCCC (4) 3.5 0.0035 3T3 fibroblasts TGCCGCCAGT 3.5 0.0035 E15 cortex CTAGTCTTTG 54.4 0.0544 E15 cortex TGCCGCCAGT 29.7 0.0297 E15 cortex GGGTTTTCCC (4) 9.9 0.0099 P1 cortex CTAGTCTTTG 181.8 0.1818 P1 cortex CTAGTTTTTG 4.5 0.0045 Hypothalamus CTAGTCTTTG 262.6 0.2626 Hypothalamus ATCGGTTCCA (2) 10.9 0.0109 Hypothalamus TTCAGCCCGT 9.1 0.0091 Hypothalamus GGGTTTTCCC (4) 5.4 0.0054 Hypothalamus TGCCGCCAGT 3.6 0.0036 Hypothalamus TTAGTCTTTG (2) 3.6 0.0036 E12.5 retina CTAGTCTTTG 503.1 0.5031 E12.5 retina ATCGGTTCCA (2) 1.9 0.0019 E12.5 retina GGGTTTTCCC (4) 1.9 0.0019 E12.5 retina TGCCGCCAGT 1.9 0.0019 E14.5 retina CTAGTCTTTG 406.3 0.4063 E14.5 retina ATCGGTTCCA (2) 14.6 0.0146 E14.5 retina CTATTCTTTG 1.8 0.0018 E14.5 retina GGGTTTTCCC (4) 1.8 0.0018 E14.5 retina TGCCGCCAGT 1.8 0.0018 E14.5 retina TTCAGCCCGT 1.8 0.0018 E16.5 retina CTAGTCTTTG 516.2 0.5162 E16.5 retina ATCGGTTCCA (2) 16.3 0.0163 E16.5 retina TGCCGCCAGT 14.5 0.0145 E16.5 retina TTCAGCCCGT 3.6 0.0036 E18.5 retina CTAGTCTTTG 543.9 0.5439 E18.5 retina ATCGGTTCCA (2) 9.1 0.0091 E18.5 retina GGGTTTTCCC (4) 5.5 0.0055 E18.5 retina CTATTCTTTG 1.8 0.0018 P0.5 retina CTAGTCTTTG 357.2 0.3572 P0.5 retina TTCAGCCCGT 5.9 0.0059 P0.5 retina CTAGTTTTTG 3.9 0.0039 P0.5 retina GGGTTTTCCC (4) 3.9 0.0039 P0.5 retina TGCCGCCAGT 2 0.002 P0.5 retina TTAGTCTTTG (2) 2 0.002 P2.5 retina CTAGTCTTTG 362.5 0.3625 P2.5 retina TTAGTCTTTG (2) 7 0.007 P2.5 retina ATCGGTTCCA (2) 1.8 0.0018 P2.5 retina CTAGTTTTTG 1.8 0.0018 P2.5 retina GGGTTTTCCC (4) 1.8 0.0018 P4.5 retina CTAGTCTTTG 346.7 0.3467 P4.5 retina ATCGGTTCCA (2) 2 0.002 P4.5 retina GGGTTTTCCC (4) 2 0.002 P6.5 retina CTAGTCTTTG 253.4 0.2534 P6.5 retina ATCGGTTCCA (2) 3.3 0.0033 P6.5 retina TTCAGCCCGT 1.7 0.0017 P10.5 crx- retina CTAGTCTTTG 228.5 0.2285 P10.5 crx- retina TGCCGCCAGT 3.7 0.0037 P10.5 crx- retina GGGTTTTCCC (4) 1.9 0.0019 P10.5 crx- retina TTCAGCCCGT 1.9 0.0019 P10.5 crx+ retina CTAGTCTTTG 123 0.123 P10.5 crx+ retina TTCAGCCCGT 3.8 0.0038 P10.5 crx+ retina ATCGGTTCCA (2) 1.9 0.0019 P10.5 crx+ retina GGGTTTTCCC (4) 1.9 0.0019 Adult retinal CTAGTCTTTG 96.3 0.0963 Adult retinal GGGTTTTCCC (4) 5.6 0.0056 ONL CTAGTCTTTG 103.4 0.1034 ONL TTAGTCTTTG (2) 3.8 0.0038 ONL TTCAGCCCGT 1.9 0.0019