Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.155704	Gopc	golgi associated PDZ and coiled-coil motif containing	10		94221
Gene Ontology	autophagy | protein binding | small GTPase regulatory/interacting protein activity | synaptosome
Human Homolog	GOPC[golgi associated PDZ and coiled-coil motif containing]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAAGC (9) 1.6 0.0016 P8 Cb GC GAAGCCAGAG (4) 1.6 0.0016 P8 Cb GC TGAACAATTC 1.6 0.0016 P8 Cb GC TTAACTGGTA 1.6 0.0016 Cb medulloblastoma GTGCTGGAAT (2) 4.6 0.0046 P8 GC+1d culture GTGCTGGAAT (2) 2.3 0.0023 P8 GC+1d culture TTAACTGGTA 2.3 0.0023 P8 GC+1d culture AAGGCCTGGG (3) 1.1 0.0011 P8 GC+1d culture GAAGGCAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTAACTGGTA 2.3 0.0023 P8 GC+SHH+1d culture AAGGCCTGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAGGCAGTT (2) 1.2 0.0012 3T3 fibroblasts AAGCTGAAGC (9) 3.5 0.0035 P1 cortex TGCTGCCCTA 9.1 0.0091 P1 cortex TTAACTGGTA 4.5 0.0045 Hypothalamus AAGCTGAAGC (9) 1.8 0.0018 Hypothalamus GAAGCCAGAG (4) 1.8 0.0018 Hypothalamus TGAACAATTC 1.8 0.0018 E12.5 retina AAGCTGAAGC (9) 1.9 0.0019 E12.5 retina GAAGGCAGTT (2) 1.9 0.0019 E14.5 retina GAAGGCAGTT (2) 3.6 0.0036 E14.5 retina AAGGCCTGGG (3) 1.8 0.0018 E18.5 retina GAAGCCAGAG (4) 1.8 0.0018 E18.5 retina TGAACAATTC 1.8 0.0018 P2.5 retina GAAGCCAGAG (4) 1.8 0.0018 P2.5 retina GAAGGCAGTT (2) 1.8 0.0018 P2.5 retina TTAACTGGTA 1.8 0.0018 P4.5 retina GAAGGCAGTT (2) 2 0.002 P4.5 retina TGAACAATTC 2 0.002 P6.5 retina GAAGGCAGTT (2) 1.7 0.0017 P6.5 retina GTGCTGGAAT (2) 1.7 0.0017 P10.5 crx- retina GTGCTGGAAT (2) 3.7 0.0037 P10.5 crx+ retina GTGCTGGAAT (2) 3.8 0.0038 P10.5 crx+ retina AAGGCCTGGG (3) 1.9 0.0019 P10.5 crx+ retina GAAGGCAGTT (2) 1.9 0.0019 Adult retinal AAGCTGAAGC (9) 1.9 0.0019 Adult retinal GTGCTGGAAT (2) 1.9 0.0019 Adult retinal TTAACTGGTA 1.9 0.0019 ONL TGCTGCCCTA 1.9 0.0019