Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15694	Hira	histone cell cycle regulation defective homolog A (S. cerevisiae)	16	16 12.0 cM	15260
Gene Ontology	gastrulation | nucleus | protein binding | regulation of transcription, DNA-dependent
Human Homolog	HIRA[HIR histone cell cycle regulation defective homolog A (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTGGATAC (2) 3.3 0.0033 P8 Cb GC CACAAGGAGA (4) 1.6 0.0016 P8 Cb GC GCTCACAAGA (4) 1.6 0.0016 Cb medulloblastoma CATTGGATAC (2) 4.6 0.0046 Cb medulloblastoma GACTATTTTT (5) 2.3 0.0023 Cb medulloblastoma GCTCACAAGA (4) 2.3 0.0023 P8 GC+1d culture CATTGGATAC (2) 5.7 0.0057 P8 GC+SHH+1d culture CATTGGATAC (2) 5.9 0.0059 P8 GC+SHH+1d culture GACTATTTTT (5) 2.3 0.0023 P8 GC+SHH+1d culture GCTCACAAGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTTTGTAAT (2) 1.2 0.0012 E15 cortex GCTCACAAGA (4) 9.9 0.0099 E15 cortex CACAAGGAGA (4) 4.9 0.0049 P1 cortex CACAAGGAGA (4) 4.5 0.0045 Hypothalamus CATTGGATAC (2) 5.4 0.0054 E12.5 retina CATTGGATAC (2) 11.3 0.0113 E14.5 retina CATTGGATAC (2) 5.5 0.0055 E14.5 retina GCTCACAAGA (4) 1.8 0.0018 E16.5 retina CATTGGATAC (2) 7.2 0.0072 E16.5 retina GCTCACAAGA (4) 1.8 0.0018 E16.5 retina TGTTTGTAAT (2) 1.8 0.0018 E16.5 retina TTCATTTATT (11) 1.8 0.0018 E18.5 retina CATTGGATAC (2) 18.2 0.0182 E18.5 retina CACAAGGAGA (4) 1.8 0.0018 E18.5 retina TTCATTTATT (11) 1.8 0.0018 P0.5 retina CATTGGATAC (2) 7.9 0.0079 P0.5 retina GACTATTTTT (5) 3.9 0.0039 P2.5 retina CATTGGATAC (2) 10.6 0.0106 P2.5 retina TTCATTTATT (11) 1.8 0.0018 P4.5 retina CATTGGATAC (2) 13.9 0.0139 P4.5 retina TGTTTGTAAT (2) 2 0.002 P4.5 retina TTCATTTATT (11) 2 0.002 P6.5 retina CATTGGATAC (2) 8.3 0.0083 P10.5 crx- retina CATTGGATAC (2) 5.6 0.0056 P10.5 crx- retina GCTCACAAGA (4) 1.9 0.0019 P10.5 crx+ retina CATTGGATAC (2) 13.5 0.0135 P10.5 crx+ retina GCTCACAAGA (4) 1.9 0.0019 Adult retinal CATTGGATAC (2) 5.6 0.0056 Adult retinal CACAAGGAGA (4) 1.9 0.0019 Adult retinal GCTCACAAGA (4) 1.9 0.0019 ONL CATTGGATAC (2) 3.8 0.0038 ONL TTCATTTATT (11) 1.9 0.0019