Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1571	9430099M06Rik	RIKEN cDNA 9430099M06 gene	8		77441
Mm.1571	Cdh11	cadherin 11	8	8 46.5 cM (8 46.5 cM)	12552
Gene Ontology	calcium ion binding | cell adhesion | cytoplasm | homophilic cell adhesion | integral to membrane | membrane | plasma membrane | protein binding
Human Homolog	CDH11[cadherin 11, type 2, OB-cadherin (osteoblast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTGGACTCT (5) 1.6 0.0016 P8 Cb GC TACGAAAATG (2) 1.6 0.0016 Cb medulloblastoma GGTGGACTCT (5) 2.3 0.0023 Cb medulloblastoma TACGAAAATG (2) 2.3 0.0023 P8 GC+1d culture GGTGGACTCT (5) 1.1 0.0011 P8 GC+SHH+1d culture TACGAAAATG (2) 1.2 0.0012 3T3 fibroblasts TACGAAAATG (2) 14 0.014 E15 cortex AAAAATGAGA (5) 4.9 0.0049 P1 cortex TACGAAAATG (2) 9.1 0.0091 Hypothalamus AGAAAGGGCA (5) 3.6 0.0036 Hypothalamus TACGAAAATG (2) 1.8 0.0018 Hypothalamus TCAGAATACT (2) 1.8 0.0018 E12.5 retina TACGAAAATG (2) 11.3 0.0113 E12.5 retina AGGACTGCCA (2) 1.9 0.0019 E12.5 retina TCAGAATACT (2) 1.9 0.0019 E14.5 retina AAAAATGAGA (5) 25.5 0.0255 E14.5 retina TACGAAAATG (2) 16.4 0.0164 E14.5 retina GGTGGACTCT (5) 1.8 0.0018 E14.5 retina TCAGAATACT (2) 1.8 0.0018 E16.5 retina TACGAAAATG (2) 3.6 0.0036 E16.5 retina TCAGAATACT (2) 1.8 0.0018 E18.5 retina TACGAAAATG (2) 5.5 0.0055 E18.5 retina TCAGAATACT (2) 1.8 0.0018 P0.5 retina TACGAAAATG (2) 5.9 0.0059 P0.5 retina AGAAAGGGCA (5) 2 0.002 P0.5 retina GGTGGACTCT (5) 2 0.002 P2.5 retina TACGAAAATG (2) 7 0.007 P2.5 retina TCAGAATACT (2) 1.8 0.0018 P4.5 retina TACGAAAATG (2) 13.9 0.0139 P4.5 retina AGGACTGCCA (2) 2 0.002 P6.5 retina TACGAAAATG (2) 1.7 0.0017 P6.5 retina TCAGAATACT (2) 1.7 0.0017 P10.5 crx- retina AGAAAGGGCA (5) 1.9 0.0019 P10.5 crx+ retina AGGACTGCCA (2) 1.9 0.0019 P10.5 crx+ retina TCAGAATACT (2) 1.9 0.0019 ONL AAAAATGAGA (5) 5.7 0.0057