Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.157119	Sort1	sortilin 1	3		20661
Gene Ontology	endocytosis | endosome | extracellular space | integral to membrane | neurotensin receptor activity, G-protein coupled | receptor activity
Human Homolog	SORT1[sortilin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAGGTGGGA 8.2 0.0082 P8 Cb GC TTTTAAATTT (9) 3.3 0.0033 P8 Cb GC ACTTTCTTTC (4) 1.6 0.0016 P8 Cb GC AGCACAGGAA (3) 1.6 0.0016 Cb medulloblastoma TGAGGTGGGA 6.9 0.0069 Cb medulloblastoma ACTTTCTTTC (4) 2.3 0.0023 P8 GC+1d culture TGAGGTGGGA 12.6 0.0126 P8 GC+1d culture ACTTTCTTTC (4) 2.3 0.0023 P8 GC+1d culture TTTTAAATTT (9) 2.3 0.0023 P8 GC+SHH+1d culture TGAGGTGGGA 9.4 0.0094 P8 GC+SHH+1d culture ACTTTCTTTC (4) 1.2 0.0012 E15 cortex TGAGGTGGGA 9.9 0.0099 E15 cortex TTTTAAATTT (9) 4.9 0.0049 P1 cortex ACTTTCTTTC (4) 9.1 0.0091 P1 cortex TGAGGTGGGA 4.5 0.0045 Hypothalamus ACTTTCTTTC (4) 3.6 0.0036 Hypothalamus TGAGGTGGGA 1.8 0.0018 E12.5 retina ACTTTCTTTC (4) 7.5 0.0075 E12.5 retina TGAGGTGGGA 7.5 0.0075 E12.5 retina TTTTAAATTT (9) 3.8 0.0038 E14.5 retina TGAGGTGGGA 10.9 0.0109 E14.5 retina ACTTTCTTTC (4) 5.5 0.0055 E14.5 retina TTTTAAATTT (9) 5.5 0.0055 E16.5 retina TGAGGTGGGA 5.4 0.0054 E16.5 retina ACTTTCTTTC (4) 1.8 0.0018 E18.5 retina TGAGGTGGGA 5.5 0.0055 E18.5 retina AGCACAGGAA (3) 1.8 0.0018 P0.5 retina ACTTTCTTTC (4) 9.8 0.0098 P0.5 retina TGAGGTGGGA 3.9 0.0039 P2.5 retina ACTTTCTTTC (4) 7 0.007 P2.5 retina TGAGGTGGGA 7 0.007 P2.5 retina TTTTAAATTT (9) 1.8 0.0018 P4.5 retina ACTTTCTTTC (4) 13.9 0.0139 P4.5 retina TGAGGTGGGA 4 0.004 P6.5 retina ACTTTCTTTC (4) 8.3 0.0083 P6.5 retina TGAGGTGGGA 1.7 0.0017 P10.5 crx- retina ACTTTCTTTC (4) 9.3 0.0093 P10.5 crx- retina TGAGGTGGGA 3.7 0.0037 P10.5 crx- retina TTTTAAATTT (9) 1.9 0.0019 P10.5 crx+ retina ACTTTCTTTC (4) 5.8 0.0058 P10.5 crx+ retina TGAGGTGGGA 3.8 0.0038 Adult retinal TGAGGTGGGA 1.9 0.0019 ONL TGAGGTGGGA 3.8 0.0038 ONL ACTTTCTTTC (4) 1.9 0.0019 ONL AGCACAGGAA (3) 1.9 0.0019 ONL TTTTAAATTT (9) 1.9 0.0019