Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15755	Sin3a	transcriptional regulator, SIN3A (yeast)	9	9 30.0 cM	20466
Gene Ontology	kinetochore | negative regulation of transcription from Pol II promoter | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription corepressor activity
Human Homolog	SIN3A[SIN3 homolog A, transcriptional regulator (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCATCCAGCC (3) 62 0.062 P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC GAGAAAACCA (7) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma GCATCCAGCC (3) 4.6 0.0046 Cb medulloblastoma TGGCTTCAGA (2) 2.3 0.0023 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture TGGCTTCAGA (2) 2.3 0.0023 P8 GC+1d culture GCATCCAGCC (3) 1.1 0.0011 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture TGGCTTCAGA (2) 2.3 0.0023 P8 GC+SHH+1d culture GAGAAAACCA (7) 1.2 0.0012 P8 GC+SHH+1d culture GCATCCAGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GTTTCTCTGT (11) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts GTTTCTCTGT (11) 3.5 0.0035 E15 cortex GCATCCAGCC (3) 9.9 0.0099 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex GCATCCAGCC (3) 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 E12.5 retina TGAAGAGCCA (2) 5.6 0.0056 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GTTTCTCTGT (11) 1.9 0.0019 E12.5 retina TGGCTTCAGA (2) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina TGGCTTCAGA (2) 3.6 0.0036 E14.5 retina GTTTCTCTGT (11) 1.8 0.0018 E14.5 retina TGAAGAGCCA (2) 1.8 0.0018 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina GCATCCAGCC (3) 7.2 0.0072 E16.5 retina GTTTCTCTGT (11) 3.6 0.0036 E16.5 retina CCATCAACTA 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina GTTTCTCTGT (11) 3.6 0.0036 E18.5 retina GAGGCCAGGT (3) 1.8 0.0018 E18.5 retina GCATCCAGCC (3) 1.8 0.0018 E18.5 retina TGGCTTCAGA (2) 1.8 0.0018 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina TGGCTTCAGA (2) 3.9 0.0039 P0.5 retina GTTTCTCTGT (11) 2 0.002 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina TGGCTTCAGA (2) 7 0.007 P2.5 retina CCATCAACTA 1.8 0.0018 P2.5 retina GCATCCAGCC (3) 1.8 0.0018 P2.5 retina GTTTCTCTGT (11) 1.8 0.0018 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina TGGCTTCAGA (2) 4 0.004 P4.5 retina CCATCAACTA 2 0.002 P4.5 retina GTTTCTCTGT (11) 2 0.002 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina GCATCCAGCC (3) 1.7 0.0017 P6.5 retina TGGCTTCAGA (2) 1.7 0.0017 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina GCATCCAGCC (3) 1.9 0.0019 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina TGAAGAGCCA (2) 3.8 0.0038 P10.5 crx+ retina GAGAAAACCA (7) 1.9 0.0019 P10.5 crx+ retina GTTTCTCTGT (11) 1.9 0.0019 P10.5 crx+ retina TGGCTTCAGA (2) 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal GTTTCTCTGT (11) 1.9 0.0019 Adult retinal TGAAGAGCCA (2) 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL GTTTCTCTGT (11) 3.8 0.0038 ONL GAGGCCAGGT (3) 1.9 0.0019