Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.157700
Niban
niban protein
1
63913
Mm.157700
AU019833
expressed sequence AU019833
1
98556
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGGCTTTCA
(
6
)
22.8
0.0228
P8 Cb GC
TTCTTAGTTT (
3
)
4.9
0.0049
P8 Cb GC
AATGAAAAAA (
8
)
3.3
0.0033
P8 Cb GC
CTTGTCAGTG (
4
)
1.6
0.0016
Cb medulloblastoma
CTGGCTTTCA
(
6
)
9.2
0.0092
Cb medulloblastoma
TTCTTAGTTT (
3
)
6.9
0.0069
Cb medulloblastoma
AATGAAAAAA (
8
)
2.3
0.0023
P8 GC+1d culture
CTGGCTTTCA
(
6
)
9.1
0.0091
P8 GC+1d culture
TTCTTAGTTT (
3
)
5.7
0.0057
P8 GC+1d culture
AATGAAAAAA (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGGCTTTCA
(
6
)
19.9
0.0199
P8 GC+SHH+1d culture
AATGAAAAAA (
8
)
3.5
0.0035
P8 GC+SHH+1d culture
TTCTTAGTTT (
3
)
2.3
0.0023
3T3 fibroblasts
CTGGCTTTCA
(
6
)
45.6
0.0456
E15 cortex
CTGGCTTTCA
(
6
)
19.8
0.0198
E15 cortex
AATGAAAAAA (
8
)
4.9
0.0049
P1 cortex
CTGGCTTTCA
(
6
)
13.6
0.0136
Hypothalamus
CTGGCTTTCA
(
6
)
1.8
0.0018
E12.5 retina
CTGGCTTTCA
(
6
)
15
0.015
E14.5 retina
CTGGCTTTCA
(
6
)
21.9
0.0219
E14.5 retina
AATGAAAAAA (
8
)
14.6
0.0146
E16.5 retina
CTGGCTTTCA
(
6
)
19.9
0.0199
E16.5 retina
AATGAAAAAA (
8
)
3.6
0.0036
E16.5 retina
TTCTTAGTTT (
3
)
1.8
0.0018
E18.5 retina
AATGAAAAAA (
8
)
14.6
0.0146
E18.5 retina
CTGGCTTTCA
(
6
)
7.3
0.0073
P0.5 retina
CTGGCTTTCA
(
6
)
13.7
0.0137
P0.5 retina
TTCTTAGTTT (
3
)
3.9
0.0039
P0.5 retina
AATGAAAAAA (
8
)
2
0.002
P2.5 retina
CTGGCTTTCA
(
6
)
35.2
0.0352
P2.5 retina
AATGAAAAAA (
8
)
14.1
0.0141
P2.5 retina
TTCTTAGTTT (
3
)
1.8
0.0018
P4.5 retina
CTGGCTTTCA
(
6
)
13.9
0.0139
P4.5 retina
AATGAAAAAA (
8
)
9.9
0.0099
P4.5 retina
TTCTTAGTTT (
3
)
4
0.004
P4.5 retina
CTTGTCAGTG (
4
)
2
0.002
P6.5 retina
CTGGCTTTCA
(
6
)
21.7
0.0217
P10.5 crx- retina
TTCTTAGTTT (
3
)
5.6
0.0056
P10.5 crx+ retina
TTCTTAGTTT (
3
)
1.9
0.0019
Adult retinal
CTGGCTTTCA
(
6
)
11.1
0.0111
Adult retinal
CTTGTCAGTG (
4
)
1.9
0.0019
Adult retinal
TTCTTAGTTT (
3
)
1.9
0.0019
ONL
AATGAAAAAA (
8
)
1.9
0.0019
ONL
CTGGCTTTCA
(
6
)
1.9
0.0019
ONL
TTCTTAGTTT (
3
)
1.9
0.0019
