Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.157758
D13Wsu177e
DNA segment, Chr 13, Wayne State University 177, expressed
13
13 34.0 cM
28126
Human Homolog
HSPC111[hypothetical protein HSPC111]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 67 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
ACTAGGTGGG
(
2
)
1.6
0.0016
P8 Cb GC
TGTTTGTGTT (
11
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
GCCATCTTCT
(
6
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
TGTGTCTGTG (
16
)
2.3
0.0023
P8 GC+1d culture
ACTAGGTGGG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
ACTAGGTGGG
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
3T3 fibroblasts
TGTGTCTGTG (
16
)
7
0.007
3T3 fibroblasts
GCCATCTTCT
(
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
GCCATCTTCT
(
6
)
3.6
0.0036
Hypothalamus
TGTGTCTGTG (
16
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
TGTGTCTGTG (
16
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
ATAAAGGAAT
(
2
)
3.6
0.0036
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
ATAAAGGAAT
(
2
)
1.8
0.0018
E18.5 retina
TGTGTCTGTG (
16
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
TGTTTGTGTT (
11
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
TGTGTCTGTG (
16
)
5.3
0.0053
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
ATAAAGGAAT
(
2
)
4
0.004
P4.5 retina
ACTAGGTGGG
(
2
)
2
0.002
P4.5 retina
TGTGTCTGTG (
16
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
TGTGTCTGTG (
16
)
3.3
0.0033
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
ACTAGGTGGG
(
2
)
3.7
0.0037
P10.5 crx- retina
TGTGTCTGTG (
16
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGTGTCTGTG (
16
)
30.8
0.0308
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
ACTAGGTGGG
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TGTGTCTGTG (
16
)
31.5
0.0315
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
TGTGTCTGTG (
16
)
11.5
0.0115
ONL
TGTTTGTGTT (
11
)
1.9
0.0019
