Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.157770	Cnn2	calponin 2	10		12798
Gene Ontology	actin binding | calmodulin binding | smooth muscle contraction
Human Homolog	CNN2[calponin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACACTGCA (3) 1.6 0.0016 P8 Cb GC TCCCTGAAGA (5) 1.6 0.0016 Cb medulloblastoma AACCCTGTGG 2.3 0.0023 Cb medulloblastoma AGAGAAATCT (3) 2.3 0.0023 Cb medulloblastoma GAACACTGCA (3) 2.3 0.0023 Cb medulloblastoma GGCCCAACAA (5) 2.3 0.0023 P8 GC+1d culture ACCCACACGG 3.4 0.0034 P8 GC+1d culture GGCCCAACAA (5) 2.3 0.0023 P8 GC+1d culture GTCAGAGGCT (4) 1.1 0.0011 P8 GC+SHH+1d culture GGCCCAACAA (5) 7 0.007 P8 GC+SHH+1d culture ACCCACACGG 1.2 0.0012 P8 GC+SHH+1d culture TCCCTGAAGA (5) 1.2 0.0012 3T3 fibroblasts ACCCACACGG 31.5 0.0315 3T3 fibroblasts AACCCTGTGG 3.5 0.0035 E15 cortex GGTTTCCTTG (2) 9.9 0.0099 P1 cortex AGAGAAATCT (3) 9.1 0.0091 P1 cortex GGCCCAACAA (5) 9.1 0.0091 Hypothalamus ACCCACACGG 1.8 0.0018 Hypothalamus GGCCCAACAA (5) 1.8 0.0018 E12.5 retina GTCAGAGGCT (4) 7.5 0.0075 E12.5 retina GGCCCAACAA (5) 1.9 0.0019 E12.5 retina TCCCTGAAGA (5) 1.9 0.0019 E14.5 retina GGCCCAACAA (5) 3.6 0.0036 E14.5 retina GTCAGAGGCT (4) 1.8 0.0018 E16.5 retina TCCCTGAAGA (5) 3.6 0.0036 E16.5 retina ACCCACACGG 1.8 0.0018 E16.5 retina GGCCCAACAA (5) 1.8 0.0018 E18.5 retina GAACACTGCA (3) 5.5 0.0055 E18.5 retina GTCAGAGGCT (4) 5.5 0.0055 E18.5 retina GGCCCAACAA (5) 3.6 0.0036 P0.5 retina GGCCCAACAA (5) 2 0.002 P2.5 retina GGCCCAACAA (5) 3.5 0.0035 P2.5 retina GTCAGAGGCT (4) 3.5 0.0035 P2.5 retina TCCCTGAAGA (5) 1.8 0.0018 P4.5 retina GGCCCAACAA (5) 4 0.004 P4.5 retina GTCAGAGGCT (4) 2 0.002 P6.5 retina GGCCCAACAA (5) 1.7 0.0017 P6.5 retina TCCCTGAAGA (5) 1.7 0.0017 P10.5 crx- retina GGCCCAACAA (5) 3.7 0.0037 P10.5 crx- retina GGTTTCCTTG (2) 1.9 0.0019 P10.5 crx+ retina GGCCCAACAA (5) 1.9 0.0019 P10.5 crx+ retina GTCAGAGGCT (4) 1.9 0.0019 Adult retinal GAACACTGCA (3) 1.9 0.0019 ONL GGCCCAACAA (5) 1.9 0.0019