Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.157778	2610034E13Rik	RIKEN cDNA 2610034E13 gene	7	7 7.0 cM	75613
Human Homolog	ARC92[ARC/mediator transcriptional coactivator subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC CGCCTGGCAG (2) 1.6 0.0016 P8 Cb GC CGTTCACCAT 1.6 0.0016 P8 Cb GC GACCTCATCT (3) 1.6 0.0016 P8 Cb GC TGGTGTTTGT (7) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma GAATAAAAAC (6) 13.9 0.0139 Cb medulloblastoma GAATAAAACA 4.6 0.0046 Cb medulloblastoma CGTTCACCAT 2.3 0.0023 Cb medulloblastoma GACCTCATCT (3) 2.3 0.0023 Cb medulloblastoma TGGTGTTTGT (7) 2.3 0.0023 P8 GC+1d culture GACCTCATCT (3) 13.7 0.0137 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture GAATAAAAAC (6) 2.3 0.0023 P8 GC+1d culture GGCCTCATCC (4) 2.3 0.0023 P8 GC+1d culture ACCAGTGGCC (2) 1.1 0.0011 P8 GC+1d culture CGTTCACCAT 1.1 0.0011 P8 GC+1d culture GAATAAAACA 1.1 0.0011 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture GACCTCATCT (3) 9.4 0.0094 P8 GC+SHH+1d culture GAATAAAACA 3.5 0.0035 P8 GC+SHH+1d culture CGTTCACCAT 2.3 0.0023 P8 GC+SHH+1d culture GAATAAAAAC (6) 2.3 0.0023 P8 GC+SHH+1d culture CTCTGATGTG (4) 1.2 0.0012 3T3 fibroblasts CAGTGCAGTG (3) 3.5 0.0035 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex GACCTCATCT (3) 9.9 0.0099 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex CAGTGCAGTG (3) 4.9 0.0049 E15 cortex CGTTCACCAT 4.9 0.0049 P1 cortex GACCTCATCT (3) 9.1 0.0091 P1 cortex CGTTCACCAT 4.5 0.0045 P1 cortex CTCTGATGTG (4) 4.5 0.0045 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus GAATAAAACA 7.2 0.0072 Hypothalamus GACCTCATCT (3) 7.2 0.0072 Hypothalamus CGCCTGGCAG (2) 5.4 0.0054 Hypothalamus CTCTGATGTG (4) 3.6 0.0036 Hypothalamus CAGTGCAGTG (3) 1.8 0.0018 Hypothalamus GAATAAAAAC (6) 1.8 0.0018 Hypothalamus GGCCTCATCC (4) 1.8 0.0018 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina CGTTCACCAT 7.5 0.0075 E12.5 retina GACCTCATCT (3) 7.5 0.0075 E12.5 retina ACCAGTGGCC (2) 5.6 0.0056 E12.5 retina GAATAAAAAC (6) 3.8 0.0038 E12.5 retina CTCTGATGTG (4) 1.9 0.0019 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina GACCTCATCT (3) 10.9 0.0109 E14.5 retina GAATAAAAAC (6) 1.8 0.0018 E14.5 retina GAATAAAACA 1.8 0.0018 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina GACCTCATCT (3) 7.2 0.0072 E16.5 retina CTCTGATGTG (4) 5.4 0.0054 E16.5 retina GAATAAAACA 5.4 0.0054 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina GAATAAAACA 7.3 0.0073 E18.5 retina CGTTCACCAT 5.5 0.0055 E18.5 retina GACCTCATCT (3) 5.5 0.0055 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina CTCTGATGTG (4) 11.8 0.0118 P0.5 retina GACCTCATCT (3) 11.8 0.0118 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina GACCTCATCT (3) 19.4 0.0194 P2.5 retina ACCAGTGGCC (2) 5.3 0.0053 P2.5 retina CGTTCACCAT 5.3 0.0053 P2.5 retina GAATAAAAAC (6) 5.3 0.0053 P2.5 retina CTCTGATGTG (4) 3.5 0.0035 P2.5 retina GGCCTCATCC (4) 1.8 0.0018 P2.5 retina TGGTGTTTGT (7) 1.8 0.0018 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina CGTTCACCAT 13.9 0.0139 P4.5 retina GACCTCATCT (3) 11.9 0.0119 P4.5 retina GAATAAAAAC (6) 5.9 0.0059 P4.5 retina CTCTGATGTG (4) 4 0.004 P4.5 retina GAATAAAACA 4 0.004 P6.5 retina GACCTCATCT (3) 16.7 0.0167 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina CTCTGATGTG (4) 6.7 0.0067 P6.5 retina CGTTCACCAT 5 0.005 P6.5 retina GAATAAAAAC (6) 1.7 0.0017 P6.5 retina GAATAAAACA 1.7 0.0017 P10.5 crx- retina GACCTCATCT (3) 9.3 0.0093 P10.5 crx- retina CGTTCACCAT 5.6 0.0056 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina CTCTGATGTG (4) 3.7 0.0037 P10.5 crx- retina CGCCTGGCAG (2) 1.9 0.0019 P10.5 crx- retina GGCCTCATCC (4) 1.9 0.0019 P10.5 crx+ retina CGTTCACCAT 5.8 0.0058 P10.5 crx+ retina CTCTGATGTG (4) 5.8 0.0058 P10.5 crx+ retina GACCTCATCT (3) 3.8 0.0038 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 Adult retinal CTCTGATGTG (4) 11.1 0.0111 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal GACCTCATCT (3) 3.7 0.0037 Adult retinal ACCAGTGGCC (2) 1.9 0.0019 Adult retinal CGTTCACCAT 1.9 0.0019 Adult retinal GGCCTCATCC (4) 1.9 0.0019 ONL GACCTCATCT (3) 9.6 0.0096 ONL CGTTCACCAT 3.8 0.0038 ONL GAATAAAAAC (6) 3.8 0.0038 ONL CTCTGATGTG (4) 1.9 0.0019 ONL GCAAAAAAAA (50) 1.9 0.0019