Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1583	Ly6c	lymphocyte antigen 6 complex, locus C	15	15 42.7 cM	17067
Gene Ontology	defense response | external side of plasma membrane | extracellular space | membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGCCTGTC 3.3 0.0033 P8 Cb GC TGCCACCACT (9) 3.3 0.0033 P8 Cb GC TGGGAAGTGT (8) 3.3 0.0033 Cb medulloblastoma TATGCCTGTC 16.2 0.0162 Cb medulloblastoma TGCCACCACT (9) 4.6 0.0046 Cb medulloblastoma TGGGAAGTGT (8) 2.3 0.0023 P8 GC+1d culture TGGGAAGTGT (8) 20.5 0.0205 P8 GC+1d culture GTGGGCCCAG (5) 3.4 0.0034 P8 GC+1d culture GCCCCCAGCC (4) 2.3 0.0023 P8 GC+1d culture TGCCACCACT (9) 2.3 0.0023 P8 GC+SHH+1d culture TGGGAAGTGT (8) 8.2 0.0082 P8 GC+SHH+1d culture TGCCACCACT (9) 4.7 0.0047 P8 GC+SHH+1d culture GCCCCCAGCC (4) 1.2 0.0012 3T3 fibroblasts TGCCACCACT (9) 14 0.014 3T3 fibroblasts TATGCCTGTC 10.5 0.0105 3T3 fibroblasts TGGGAAGTGT (8) 10.5 0.0105 3T3 fibroblasts GCCCCCAGCC (4) 7 0.007 3T3 fibroblasts GCAGGGGGTG (5) 3.5 0.0035 E15 cortex GCAGGGGGTG (5) 4.9 0.0049 E15 cortex TGCCACCACT (9) 4.9 0.0049 E15 cortex TGGGAAGTGT (8) 4.9 0.0049 P1 cortex TGGGAAGTGT (8) 18.2 0.0182 P1 cortex TATGCCTGTC 4.5 0.0045 P1 cortex TGCCACCACT (9) 4.5 0.0045 Hypothalamus TATGCCTGTC 12.7 0.0127 Hypothalamus TGCCACCACT (9) 7.2 0.0072 Hypothalamus GCCCCCAGCC (4) 3.6 0.0036 Hypothalamus TGGGAAGTGT (8) 3.6 0.0036 E12.5 retina TGGGAAGTGT (8) 9.4 0.0094 E12.5 retina TGCCACCACT (9) 3.8 0.0038 E14.5 retina TGGGAAGTGT (8) 12.8 0.0128 E14.5 retina TGCCACCACT (9) 9.1 0.0091 E16.5 retina TGCCACCACT (9) 5.4 0.0054 E16.5 retina TGGGAAGTGT (8) 5.4 0.0054 E18.5 retina TGGGAAGTGT (8) 7.3 0.0073 E18.5 retina TGCCACCACT (9) 1.8 0.0018 P0.5 retina TGCCACCACT (9) 5.9 0.0059 P0.5 retina TGGGAAGTGT (8) 3.9 0.0039 P0.5 retina GCAGGGGGTG (5) 2 0.002 P2.5 retina TGGGAAGTGT (8) 5.3 0.0053 P2.5 retina TGCCACCACT (9) 3.5 0.0035 P4.5 retina TGCCACCACT (9) 5.9 0.0059 P4.5 retina GTGGGCCCAG (5) 2 0.002 P6.5 retina GTGGGCCCAG (5) 1.7 0.0017 P6.5 retina TGCCACCACT (9) 1.7 0.0017 P10.5 crx- retina TGGGAAGTGT (8) 3.7 0.0037 P10.5 crx- retina GCCCCCAGCC (4) 1.9 0.0019 P10.5 crx+ retina TGGGAAGTGT (8) 3.8 0.0038 P10.5 crx+ retina TATGCCTGTC 1.9 0.0019 P10.5 crx+ retina TGCCACCACT (9) 1.9 0.0019 Adult retinal TGGGAAGTGT (8) 5.6 0.0056 Adult retinal TGCCACCACT (9) 1.9 0.0019 ONL TGCCACCACT (9) 3.8 0.0038 ONL TATGCCTGTC 1.9 0.0019