Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.158868	Lrrn1	leucine rich repeat protein 1, neuronal	6		16979
Gene Ontology	extracellular space | integral to membrane
Human Homolog	LRRN1[leucine rich repeat neuronal 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAATTGTTA (2) 4.9 0.0049 P8 Cb GC ACATTAAAAA (4) 3.3 0.0033 P8 Cb GC GCTGAGCCAG (6) 1.6 0.0016 Cb medulloblastoma ACATTAAAAA (4) 20.8 0.0208 Cb medulloblastoma GTAATTGTTA (2) 6.9 0.0069 Cb medulloblastoma ACATTGGAAA (4) 4.6 0.0046 Cb medulloblastoma TAGTTCATTA 4.6 0.0046 P8 GC+1d culture GTAATTGTTA (2) 5.7 0.0057 P8 GC+1d culture ACATTAAAAA (4) 4.6 0.0046 P8 GC+1d culture TAGTTCATTA 2.3 0.0023 P8 GC+1d culture GCCAGATTGA (2) 1.1 0.0011 P8 GC+1d culture GCTGAGCCAG (6) 1.1 0.0011 P8 GC+SHH+1d culture ACATTAAAAA (4) 4.7 0.0047 P8 GC+SHH+1d culture GTAATTGTTA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACATTGGAAA (4) 1.2 0.0012 3T3 fibroblasts GCCAGATTGA (2) 7 0.007 E15 cortex GCCAGATTGA (2) 4.9 0.0049 E15 cortex GCTGAGCCAG (6) 4.9 0.0049 P1 cortex GTAATTGTTA (2) 4.5 0.0045 Hypothalamus ACATTAAAAA (4) 3.6 0.0036 E12.5 retina ACATTAAAAA (4) 3.8 0.0038 E14.5 retina ACATTAAAAA (4) 9.1 0.0091 E14.5 retina ACATTGGAAA (4) 1.8 0.0018 E14.5 retina GTAATTGTTA (2) 1.8 0.0018 E16.5 retina GCCAGATTGA (2) 3.6 0.0036 E16.5 retina ACATTAAAAA (4) 1.8 0.0018 E18.5 retina ACATTAAAAA (4) 3.6 0.0036 E18.5 retina GTAATTGTTA (2) 1.8 0.0018 P0.5 retina GCCAGATTGA (2) 2 0.002 P2.5 retina ACATTAAAAA (4) 5.3 0.0053 P2.5 retina GTAATTGTTA (2) 1.8 0.0018 P4.5 retina ACATTAAAAA (4) 7.9 0.0079 P4.5 retina GTAATTGTTA (2) 4 0.004 P6.5 retina ACATTAAAAA (4) 6.7 0.0067 P10.5 crx- retina ACATTAAAAA (4) 14.9 0.0149 P10.5 crx- retina GTAATTGTTA (2) 3.7 0.0037 P10.5 crx- retina TAGTTCATTA 1.9 0.0019 P10.5 crx+ retina ACATTAAAAA (4) 3.8 0.0038 ONL ACATTAAAAA (4) 3.8 0.0038