Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.159621
AA517576
expressed sequence AA517576
6
101048
Mm.159621
Sec15l2
SEC15-like 2 (S. cerevisiae)
6
75914
Human Homolog
SEC15L2[SEC15-like 2 (S. cerevisiae)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATGATAAAA (
5
)
11.4
0.0114
P8 Cb GC
GGTAGGAGCC (
3
)
3.3
0.0033
P8 Cb GC
GAGATCTCTC (
3
)
1.6
0.0016
Cb medulloblastoma
AATGATAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
AATGATAAAA (
5
)
4.6
0.0046
P8 GC+1d culture
GGTAGGAGCC (
3
)
3.4
0.0034
P8 GC+1d culture
CAGCTGAAGA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AATGATAAAA (
5
)
11.7
0.0117
P8 GC+SHH+1d culture
GGTAGGAGCC (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AGTAACCCAC
(
4
)
1.2
0.0012
3T3 fibroblasts
GGTAGGAGCC (
3
)
7
0.007
E15 cortex
AATGATAAAA (
5
)
4.9
0.0049
E15 cortex
GGTAGGAGCC (
3
)
4.9
0.0049
P1 cortex
AATGATAAAA (
5
)
4.5
0.0045
Hypothalamus
AATGATAAAA (
5
)
1.8
0.0018
Hypothalamus
GGTAGGAGCC (
3
)
1.8
0.0018
E12.5 retina
AATGATAAAA (
5
)
13.1
0.0131
E12.5 retina
AGTAACCCAC
(
4
)
1.9
0.0019
E12.5 retina
GGTAGGAGCC (
3
)
1.9
0.0019
E14.5 retina
AATGATAAAA (
5
)
31
0.031
E14.5 retina
AGTAACCCAC
(
4
)
1.8
0.0018
E16.5 retina
AATGATAAAA (
5
)
21.7
0.0217
E16.5 retina
GAGATCTCTC (
3
)
3.6
0.0036
E16.5 retina
AGTAACCCAC
(
4
)
1.8
0.0018
E16.5 retina
GGTAGGAGCC (
3
)
1.8
0.0018
E18.5 retina
AATGATAAAA (
5
)
30.9
0.0309
E18.5 retina
AGTAACCCAC
(
4
)
1.8
0.0018
E18.5 retina
GAGATCTCTC (
3
)
1.8
0.0018
P0.5 retina
AATGATAAAA (
5
)
7.9
0.0079
P0.5 retina
AGTAACCCAC
(
4
)
3.9
0.0039
P2.5 retina
AATGATAAAA (
5
)
15.8
0.0158
P2.5 retina
CAGCTGAAGA
(
3
)
5.3
0.0053
P2.5 retina
AGTAACCCAC
(
4
)
3.5
0.0035
P4.5 retina
AATGATAAAA (
5
)
11.9
0.0119
P4.5 retina
AGTAACCCAC
(
4
)
2
0.002
P4.5 retina
GGTAGGAGCC (
3
)
2
0.002
P6.5 retina
AATGATAAAA (
5
)
6.7
0.0067
P6.5 retina
CAGCTGAAGA
(
3
)
1.7
0.0017
P6.5 retina
GAGATCTCTC (
3
)
1.7
0.0017
P10.5 crx- retina
AATGATAAAA (
5
)
5.6
0.0056
P10.5 crx- retina
GGTAGGAGCC (
3
)
5.6
0.0056
P10.5 crx+ retina
GGTAGGAGCC (
3
)
5.8
0.0058
P10.5 crx+ retina
AATGATAAAA (
5
)
3.8
0.0038
Adult retinal
GGTAGGAGCC (
3
)
5.6
0.0056
Adult retinal
AGTAACCCAC
(
4
)
3.7
0.0037
Adult retinal
AATGATAAAA (
5
)
1.9
0.0019
Adult retinal
GAGATCTCTC (
3
)
1.9
0.0019
ONL
AATGATAAAA (
5
)
5.7
0.0057
ONL
AGTAACCCAC
(
4
)
1.9
0.0019
