Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.159636
2610042L04Rik
RIKEN cDNA 2610042L04 gene
14
67055
Mm.159636
1700001E04Rik
RIKEN cDNA 1700001E04 gene
17
75438
Mm.159636
B930046C15Rik
RIKEN cDNA B930046C15 gene
319328
Mm.159636
AY358078
cDNA sequence AY358078
14
278676
Mm.159636
1700110I01Rik
RIKEN cDNA 1700110I01 gene
73549
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCATCGTT (
8
)
6.5
0.0065
P8 Cb GC
ATCACACCTG
(
7
)
1.6
0.0016
P8 Cb GC
GGGACTTGGG (
10
)
1.6
0.0016
Cb medulloblastoma
CTGCATCGTT (
8
)
9.2
0.0092
Cb medulloblastoma
ATCACACCTG
(
7
)
4.6
0.0046
Cb medulloblastoma
GGGACTTGGG (
10
)
2.3
0.0023
P8 GC+1d culture
GGGACTTGGG (
10
)
4.6
0.0046
P8 GC+1d culture
CTGCATCGTT (
8
)
3.4
0.0034
P8 GC+1d culture
GGTAAGTTTT (
12
)
3.4
0.0034
P8 GC+SHH+1d culture
CTGCATCGTT (
8
)
3.5
0.0035
P8 GC+SHH+1d culture
GGTAAGTTTT (
12
)
3.5
0.0035
P8 GC+SHH+1d culture
ATCACACCTG
(
7
)
1.2
0.0012
3T3 fibroblasts
GGGACTTGGG (
10
)
3.5
0.0035
E15 cortex
CTGCATCGTT (
8
)
19.8
0.0198
E15 cortex
GGGACTTGGG (
10
)
4.9
0.0049
E15 cortex
GGTAAGTTTT (
12
)
4.9
0.0049
P1 cortex
CTGCATCGTT (
8
)
22.7
0.0227
P1 cortex
GGTAAGTTTT (
12
)
9.1
0.0091
P1 cortex
ATCACACCTG
(
7
)
4.5
0.0045
Hypothalamus
CTGCATCGTT (
8
)
5.4
0.0054
Hypothalamus
ATCACACCTG
(
7
)
3.6
0.0036
Hypothalamus
GGGACTTGGG (
10
)
1.8
0.0018
Hypothalamus
GGTAAGTTTT (
12
)
1.8
0.0018
E12.5 retina
CTGCATCGTT (
8
)
3.8
0.0038
E12.5 retina
GGGACTTGGG (
10
)
1.9
0.0019
E14.5 retina
CTGCATCGTT (
8
)
7.3
0.0073
E14.5 retina
GGTAAGTTTT (
12
)
1.8
0.0018
E16.5 retina
CTGCATCGTT (
8
)
14.5
0.0145
E16.5 retina
ATCACACCTG
(
7
)
1.8
0.0018
E16.5 retina
GGGACTTGGG (
10
)
1.8
0.0018
E18.5 retina
GGGACTTGGG (
10
)
3.6
0.0036
E18.5 retina
CTGCATCGTT (
8
)
1.8
0.0018
E18.5 retina
GGTAAGTTTT (
12
)
1.8
0.0018
P0.5 retina
GGGACTTGGG (
10
)
3.9
0.0039
P0.5 retina
CTGCATCGTT (
8
)
2
0.002
P0.5 retina
CTGCATTGTT
(
6
)
2
0.002
P0.5 retina
GGTAAGTTTT (
12
)
2
0.002
P2.5 retina
GGGACTTGGG (
10
)
5.3
0.0053
P2.5 retina
ATCACACCTG
(
7
)
3.5
0.0035
P2.5 retina
CTGCATCGTT (
8
)
1.8
0.0018
P2.5 retina
GGTAAGTTTT (
12
)
1.8
0.0018
P4.5 retina
CTGCATCGTT (
8
)
4
0.004
P4.5 retina
GGTAAGTTTT (
12
)
4
0.004
P4.5 retina
GGGACTTGGG (
10
)
2
0.002
P6.5 retina
CTGCATCGTT (
8
)
5
0.005
P6.5 retina
GGGACTTGGG (
10
)
5
0.005
P6.5 retina
ATCACACCTG
(
7
)
1.7
0.0017
P10.5 crx- retina
CTGCATCGTT (
8
)
42.7
0.0427
P10.5 crx- retina
CTGCATTGTT
(
6
)
3.7
0.0037
P10.5 crx- retina
GGTAAGTTTT (
12
)
3.7
0.0037
P10.5 crx- retina
ATCACACCTG
(
7
)
1.9
0.0019
P10.5 crx+ retina
CTGCATCGTT (
8
)
11.5
0.0115
P10.5 crx+ retina
GGGACTTGGG (
10
)
9.6
0.0096
P10.5 crx+ retina
ATCACACCTG
(
7
)
5.8
0.0058
P10.5 crx+ retina
CTGCATTGTT
(
6
)
1.9
0.0019
Adult retinal
GGGACTTGGG (
10
)
7.4
0.0074
Adult retinal
GGTAAGTTTT (
12
)
3.7
0.0037
ONL
ATCACACCTG
(
7
)
1.9
0.0019
