Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.159777
Bnip2
BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2
9
12175
Mm.159777
5730523P12Rik
RIKEN cDNA 5730523P12 gene
9
76739
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 4 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTACGTA
(
2
)
8.2
0.0082
P8 Cb GC
GTTTGCAACT
(
4
)
1.6
0.0016
Cb medulloblastoma
TGGTTACGTA
(
2
)
4.6
0.0046
Cb medulloblastoma
GTTTGCAACT
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGTTACGTA
(
2
)
9.1
0.0091
P8 GC+1d culture
GTTTGCAACT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTACGTA
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
GCCCTGAAAA (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTTGCAACT
(
4
)
1.2
0.0012
3T3 fibroblasts
TGGTTACGTA
(
2
)
7
0.007
3T3 fibroblasts
GCCCTGAAAA (
9
)
3.5
0.0035
3T3 fibroblasts
GTGGCACATC (
7
)
3.5
0.0035
3T3 fibroblasts
TGGTCGAGAC
(
2
)
3.5
0.0035
E15 cortex
TGGTTACGTA
(
2
)
4.9
0.0049
P1 cortex
GCCCTGAAAA (
9
)
4.5
0.0045
Hypothalamus
GCCCTGAAAA (
9
)
1.8
0.0018
Hypothalamus
TGGTTACGTA
(
2
)
1.8
0.0018
E12.5 retina
TGGTTACGTA
(
2
)
11.3
0.0113
E12.5 retina
GTGGCACATC (
7
)
3.8
0.0038
E12.5 retina
GCCCTGAAAA (
9
)
1.9
0.0019
E14.5 retina
TGGTTACGTA
(
2
)
10.9
0.0109
E16.5 retina
TGGTTACGTA
(
2
)
14.5
0.0145
E16.5 retina
TGGTCGAGAC
(
2
)
1.8
0.0018
E18.5 retina
TGGTTACGTA
(
2
)
20
0.02
E18.5 retina
TGGTCGAGAC
(
2
)
3.6
0.0036
P0.5 retina
TGGTTACGTA
(
2
)
7.9
0.0079
P0.5 retina
GCCCTGAAAA (
9
)
2
0.002
P2.5 retina
TGGTTACGTA
(
2
)
31.7
0.0317
P2.5 retina
GTTTGCAACT
(
4
)
1.8
0.0018
P4.5 retina
TGGTTACGTA
(
2
)
39.6
0.0396
P4.5 retina
GCCCTGAAAA (
9
)
2
0.002
P4.5 retina
GTTTGCAACT
(
4
)
2
0.002
P6.5 retina
TGGTTACGTA
(
2
)
15
0.015
P6.5 retina
GCCCTGAAAA (
9
)
5
0.005
P10.5 crx- retina
GCCCTGAAAA (
9
)
11.1
0.0111
P10.5 crx- retina
TGGTTACGTA
(
2
)
3.7
0.0037
P10.5 crx- retina
GTTTGCAACT
(
4
)
1.9
0.0019
P10.5 crx- retina
TGGTCGAGAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGTTACGTA
(
2
)
23.1
0.0231
P10.5 crx+ retina
GCCCTGAAAA (
9
)
7.7
0.0077
P10.5 crx+ retina
GTTTGCAACT
(
4
)
3.8
0.0038
Adult retinal
TGGTTACGTA
(
2
)
16.7
0.0167
Adult retinal
GCCCTGAAAA (
9
)
9.3
0.0093
ONL
TGGTTACGTA
(
2
)
23
0.023
ONL
GCCCTGAAAA (
9
)
9.6
0.0096
