Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.160124
Phactr1
phosphatase and actin regulator 1
13
13 A4
218194
Human Homolog
PHACTR1[phosphatase and actin regulator 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCACACACA (
29
)
8.2
0.0082
P8 Cb GC
GTATTTAAAT
3.3
0.0033
P8 Cb GC
TAAATCCGAA
3.3
0.0033
Cb medulloblastoma
TAAATCCGAA
2.3
0.0023
Cb medulloblastoma
TGCACACACA (
29
)
2.3
0.0023
Cb medulloblastoma
TGTGCTGTGG (
6
)
2.3
0.0023
P8 GC+1d culture
TGCACACACA (
29
)
9.1
0.0091
P8 GC+1d culture
TAAATCCGAA
5.7
0.0057
P8 GC+1d culture
GTATTTAAAT
2.3
0.0023
P8 GC+1d culture
GGGACCCCTG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCACACACA (
29
)
16.4
0.0164
P8 GC+SHH+1d culture
GTATTTAAAT
2.3
0.0023
3T3 fibroblasts
TGCACACACA (
29
)
14
0.014
E15 cortex
TAAATCCGAA
9.9
0.0099
E15 cortex
GCTTCCCCAC (
3
)
4.9
0.0049
E15 cortex
TGTGCTGTGG (
6
)
4.9
0.0049
P1 cortex
GTATTTAAAT
9.1
0.0091
P1 cortex
GCTTCCCCAC (
3
)
4.5
0.0045
P1 cortex
TAAATCCGAA
4.5
0.0045
P1 cortex
TGCACACACA (
29
)
4.5
0.0045
Hypothalamus
GGGACCCCTG (
7
)
5.4
0.0054
Hypothalamus
GCTTCCCCAC (
3
)
1.8
0.0018
Hypothalamus
GTATTTAAAT
1.8
0.0018
Hypothalamus
TGCACACACA (
29
)
1.8
0.0018
E12.5 retina
TGCACACACA (
29
)
5.6
0.0056
E14.5 retina
TGCACACACA (
29
)
9.1
0.0091
E14.5 retina
TGTGCTGTGG (
6
)
1.8
0.0018
E16.5 retina
TGCACACACA (
29
)
9.1
0.0091
E16.5 retina
GTATTTAAAT
1.8
0.0018
E18.5 retina
TGCACACACA (
29
)
7.3
0.0073
E18.5 retina
TAAATCCGAA
3.6
0.0036
E18.5 retina
GTATTTAAAT
1.8
0.0018
E18.5 retina
GTGAAACCTT
1.8
0.0018
P0.5 retina
GTGAAACCTT
2
0.002
P0.5 retina
TGCACACACA (
29
)
2
0.002
P0.5 retina
TGTGCTGTGG (
6
)
2
0.002
P2.5 retina
TAAATCCGAA
5.3
0.0053
P2.5 retina
GTATTTAAAT
3.5
0.0035
P2.5 retina
TGCACACACA (
29
)
3.5
0.0035
P4.5 retina
GTATTTAAAT
11.9
0.0119
P4.5 retina
TAAATCCGAA
7.9
0.0079
P4.5 retina
GGGACCCCTG (
7
)
2
0.002
P4.5 retina
TGCACACACA (
29
)
2
0.002
P4.5 retina
TGTGCTGTGG (
6
)
2
0.002
P6.5 retina
TGCACACACA (
29
)
11.7
0.0117
P6.5 retina
TGTGCTGTGG (
6
)
3.3
0.0033
P6.5 retina
GTATTTAAAT
1.7
0.0017
P6.5 retina
TAAATCCGAA
1.7
0.0017
P10.5 crx- retina
GTATTTAAAT
3.7
0.0037
P10.5 crx- retina
TGCACACACA (
29
)
3.7
0.0037
P10.5 crx- retina
GGGACCCCTG (
7
)
1.9
0.0019
P10.5 crx- retina
TAAATCCGAA
1.9
0.0019
P10.5 crx+ retina
TGCACACACA (
29
)
9.6
0.0096
P10.5 crx+ retina
GTATTTAAAT
3.8
0.0038
Adult retinal
TGCACACACA (
29
)
9.3
0.0093
Adult retinal
TAAATCCGAA
1.9
0.0019
Adult retinal
TGTGCTGTGG (
6
)
1.9
0.0019
ONL
TGCACACACA (
29
)
15.3
0.0153
ONL
AGAGAAAGAA (
10
)
3.8
0.0038
ONL
TGTGCTGTGG (
6
)
3.8
0.0038