Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1618	Itgal	integrin alpha L	7	7 60.0 cM	16408
Gene Ontology	cell adhesion | cell-matrix adhesion | defense response | extracellular space | integral to membrane | integrin complex | integrin-mediated signaling pathway | magnesium ion binding | plasma membrane | protein binding | receptor activity
Human Homolog	ITGAL[integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTCTTCCC (4) 16.3 0.0163 Cb medulloblastoma TCCTCTTCCC (4) 27.7 0.0277 P8 GC+1d culture TCCTCTTCCC (4) 22.8 0.0228 P8 GC+SHH+1d culture TCCTCTTCCC (4) 17.6 0.0176 3T3 fibroblasts TCCTCTTCCC (4) 17.5 0.0175 3T3 fibroblasts GCTGCTGCAG (8) 3.5 0.0035 E15 cortex TCCTCTTCCC (4) 14.8 0.0148 E15 cortex GAGGTGGGGT (7) 4.9 0.0049 E15 cortex TGGGACAAGT (2) 4.9 0.0049 P1 cortex TCCTCTTCCC (4) 36.4 0.0364 Hypothalamus TCCTCTTCCC (4) 10.9 0.0109 Hypothalamus TGACTGAAGG (9) 1.8 0.0018 E12.5 retina TCCTCTTCCC (4) 9.4 0.0094 E12.5 retina TGACTGAAGG (9) 1.9 0.0019 E14.5 retina TCCTCTTCCC (4) 7.3 0.0073 E14.5 retina CAGTTGTGGG (2) 1.8 0.0018 E14.5 retina GCTGCTGCAG (8) 1.8 0.0018 E16.5 retina TCCTCTTCCC (4) 16.3 0.0163 E16.5 retina TGGGACAAGT (2) 1.8 0.0018 E18.5 retina TCCTCTTCCC (4) 9.1 0.0091 P0.5 retina TCCTCTTCCC (4) 13.7 0.0137 P0.5 retina TGACTGAAGG (9) 2 0.002 P0.5 retina TGGGACAAGT (2) 2 0.002 P2.5 retina TCCTCTTCCC (4) 7 0.007 P4.5 retina TCCTCTTCCC (4) 17.8 0.0178 P4.5 retina TGACTGAAGG (9) 2 0.002 P6.5 retina TCCTCTTCCC (4) 6.7 0.0067 P6.5 retina CAGTTGTGGG (2) 1.7 0.0017 P10.5 crx- retina TCCTCTTCCC (4) 7.4 0.0074 P10.5 crx+ retina TCCTCTTCCC (4) 3.8 0.0038 P10.5 crx+ retina CAGTTGTGGG (2) 1.9 0.0019 Adult retinal TCCTCTTCCC (4) 13 0.013 Adult retinal GCTGCTGCAG (8) 1.9 0.0019 Adult retinal TGACTGAAGG (9) 1.9 0.0019 ONL TCCTCTTCCC (4) 3.8 0.0038 ONL GAGGTGGGGT (7) 1.9 0.0019 ONL GCTGCTGCAG (8) 1.9 0.0019