Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.163	B2m	beta-2 microglobulin	2	2 69.0 cM	12010
Gene Ontology	antigen presentation, endogenous antigen | antigen processing, endogenous antigen via MHC class I | cellular defense response | defense response | extracellular space | integral to plasma membrane | MHC class I receptor activity | plasma membrane
Human Homolog	B2M[beta-2-microglobulin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 138 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTTCAAAAT (2) 6.5 0.0065 P8 Cb GC TCTCAAAAAA (22) 4.9 0.0049 P8 Cb GC TTTTCAAAAA (9) 3.3 0.0033 P8 Cb GC TTTTTCAAAA (7) 3.3 0.0033 P8 Cb GC TCTTCAAAAA (7) 1.6 0.0016 P8 Cb GC TTCTCAAAAA 1.6 0.0016 P8 Cb GC TTTTAAAAAA (26) 1.6 0.0016 Cb medulloblastoma TTTTCAAAAA (9) 13.9 0.0139 Cb medulloblastoma TCTCAAAAAA (22) 9.2 0.0092 Cb medulloblastoma TTTTAAAAAA (26) 9.2 0.0092 Cb medulloblastoma GTTTCGAAAA (3) 4.6 0.0046 Cb medulloblastoma CTGACGACTG 2.3 0.0023 Cb medulloblastoma CTTTCAAAAA (3) 2.3 0.0023 Cb medulloblastoma TTGTACAAAA (4) 2.3 0.0023 Cb medulloblastoma TTTTTAAAAA (5) 2.3 0.0023 P8 GC+1d culture TTTTCAAAAA (9) 37.7 0.0377 P8 GC+1d culture CTGACGACTG 11.4 0.0114 P8 GC+1d culture TGTTCAAAAT (2) 4.6 0.0046 P8 GC+1d culture TCTCAAAAAA (22) 3.4 0.0034 P8 GC+1d culture TTTTTAAAAA (5) 3.4 0.0034 P8 GC+1d culture TTTTAAAAAA (26) 2.3 0.0023 P8 GC+1d culture AGTGACATCT (5) 1.1 0.0011 P8 GC+1d culture CTTCCAAAAA (10) 1.1 0.0011 P8 GC+1d culture TTCTCAAAAA 1.1 0.0011 P8 GC+1d culture TTTTTCAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TTTTCAAAAA (9) 19.9 0.0199 P8 GC+SHH+1d culture TTTTAAAAAA (26) 10.5 0.0105 P8 GC+SHH+1d culture CTGACGACTG 7 0.007 P8 GC+SHH+1d culture TGTTCAAAAT (2) 4.7 0.0047 P8 GC+SHH+1d culture TCTCAAAAAA (22) 3.5 0.0035 P8 GC+SHH+1d culture CTTTCAAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture CCAGCACTTG 1.2 0.0012 P8 GC+SHH+1d culture TCTTCAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTCAAAA (7) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCAGCACTTG 3.5 0.0035 3T3 fibroblasts TTTTCAAAAA (9) 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TTCTCAAAAA 4.9 0.0049 P1 cortex CCAGCACTTG 4.5 0.0045 P1 cortex TTTTAAAAAA (26) 4.5 0.0045 Hypothalamus TTTTCAAAAA (9) 7.2 0.0072 Hypothalamus TCTCAAAAAA (22) 5.4 0.0054 Hypothalamus TGTTCAAAAT (2) 5.4 0.0054 Hypothalamus TTGTACAAAA (4) 3.6 0.0036 Hypothalamus TTTTCCAAAA (4) 3.6 0.0036 Hypothalamus CATAAAATAT (3) 1.8 0.0018 Hypothalamus CCAGCACTTG 1.8 0.0018 Hypothalamus CTTCCAAAAA (10) 1.8 0.0018 Hypothalamus TTTACAAAAA (8) 1.8 0.0018 Hypothalamus TTTTAAAAAA (26) 1.8 0.0018 Hypothalamus TTTTCAGAAA (6) 1.8 0.0018 Hypothalamus TTTTCTAAAA (5) 1.8 0.0018 Hypothalamus TTTTTCAAAA (7) 1.8 0.0018 E12.5 retina TGTTCAAAAT (2) 7.5 0.0075 E12.5 retina TTTTCAAAAA (9) 3.8 0.0038 E12.5 retina TTCTCAAAAA 1.9 0.0019 E12.5 retina TTTTAAAAAA (26) 1.9 0.0019 E12.5 retina TTTTCAGAAA (6) 1.9 0.0019 E12.5 retina TTTTCCAAAA (4) 1.9 0.0019 E12.5 retina TTTTTCAACA (4) 1.9 0.0019 E14.5 retina TTTTCAAAAA (9) 5.5 0.0055 E14.5 retina TCTCAAAAAA (22) 3.6 0.0036 E14.5 retina TTTTAAAAAA (26) 3.6 0.0036 E14.5 retina TGTTCAAAAT (2) 1.8 0.0018 E14.5 retina TTCTCAAAAA 1.8 0.0018 E14.5 retina TTTTTCAAAA (7) 1.8 0.0018 E16.5 retina TCTCAAAAAA (22) 3.6 0.0036 E16.5 retina TTTACAAAAA (8) 3.6 0.0036 E16.5 retina TGTTCAAAAT (2) 1.8 0.0018 E16.5 retina TTTTCTAAAA (5) 1.8 0.0018 E16.5 retina TTTTTCAAAA (7) 1.8 0.0018 E18.5 retina TTTTAAAAAA (26) 9.1 0.0091 E18.5 retina TCTCAAAAAA (22) 5.5 0.0055 E18.5 retina TTTTCCAAAA (4) 3.6 0.0036 E18.5 retina CTGACGACTG 1.8 0.0018 E18.5 retina CTTCCAAAAA (10) 1.8 0.0018 E18.5 retina TGTTCAAAAT (2) 1.8 0.0018 E18.5 retina TTCTCAAAAA 1.8 0.0018 E18.5 retina TTTTCAAAAA (9) 1.8 0.0018 E18.5 retina TTTTCTAAAA (5) 1.8 0.0018 E18.5 retina TTTTTCAAAA (7) 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CATAAAATAT (3) 2 0.002 P0.5 retina CTGACGACTG 2 0.002 P0.5 retina TGTTCAAAAT (2) 2 0.002 P0.5 retina TTTGCAAGAA 2 0.002 P2.5 retina TTTTAAAAAA (26) 5.3 0.0053 P2.5 retina CATAAAATAT (3) 3.5 0.0035 P2.5 retina CTGACGACTG 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCTCAAAAAA (22) 1.8 0.0018 P2.5 retina TGTTCAAAAT (2) 1.8 0.0018 P2.5 retina TTTTCAAAAA (9) 1.8 0.0018 P2.5 retina TTTTCCAAAA (4) 1.8 0.0018 P2.5 retina TTTTTCAAAA (7) 1.8 0.0018 P2.5 retina TTTTTCAACA (4) 1.8 0.0018 P4.5 retina TTTTAAAAAA (26) 4 0.004 P4.5 retina CCAGCACTTG 2 0.002 P4.5 retina CTTCCAAAAA (10) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TCTCAAAAAA (22) 2 0.002 P6.5 retina TTTTAAAAAA (26) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TCTCAAAAAA (22) 3.3 0.0033 P6.5 retina AGTGACATCT (5) 1.7 0.0017 P6.5 retina TGTTCAAAAT (2) 1.7 0.0017 P6.5 retina TTTACAAAAA (8) 1.7 0.0017 P10.5 crx- retina GTTTCGAAAA (3) 3.7 0.0037 P10.5 crx- retina TTTTCAAAAA (9) 3.7 0.0037 P10.5 crx- retina CATAAAATAT (3) 1.9 0.0019 P10.5 crx- retina TGTTCAAAAT (2) 1.9 0.0019 P10.5 crx- retina TTTTAAAAAA (26) 1.9 0.0019 P10.5 crx+ retina TCTCAAAAAA (22) 3.8 0.0038 P10.5 crx+ retina AGTGACATCT (5) 1.9 0.0019 P10.5 crx+ retina TTCTCAAAAA 1.9 0.0019 P10.5 crx+ retina TTTTAAAAAA (26) 1.9 0.0019 P10.5 crx+ retina TTTTTAAAAA (5) 1.9 0.0019 Adult retinal TCTCAAAAAA (22) 7.4 0.0074 Adult retinal TGTTCAAAAT (2) 3.7 0.0037 Adult retinal TTTTTAAAAA (5) 3.7 0.0037 Adult retinal AGTGACATCT (5) 1.9 0.0019 Adult retinal CTGACGACTG 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTTGCAAGAA 1.9 0.0019 Adult retinal TTTTCAAAAA (9) 1.9 0.0019 ONL TCTCAAAAAA (22) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TCTTCAAAAA (7) 3.8 0.0038 ONL TTTGCAAGAA 3.8 0.0038 ONL TTTTAAAAAA (26) 3.8 0.0038 ONL AGTGACATCT (5) 1.9 0.0019 ONL CATAAAATAT (3) 1.9 0.0019 ONL CCAGCACTTG 1.9 0.0019 ONL TTTTCAAAAA (9) 1.9 0.0019 ONL TTTTCAGAAA (6) 1.9 0.0019 ONL TTTTTAAAAA (5) 1.9 0.0019