Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16415	Mmp8	matrix metalloproteinase 8	9		17394
Gene Ontology	calcium ion binding | collagen catabolism | extracellular matrix | extracellular space | hydrolase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP8[matrix metalloproteinase 8 (neutrophil collagenase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGACACTTC (5) 6.5 0.0065 P8 Cb GC CCAGAAAAAA (8) 4.9 0.0049 P8 Cb GC GGTGGGAATG (6) 4.9 0.0049 P8 Cb GC ATTCAACACA (9) 1.6 0.0016 Cb medulloblastoma CCAGAAAAAA (8) 2.3 0.0023 Cb medulloblastoma GGTGGGAATG (6) 2.3 0.0023 Cb medulloblastoma TTCCCAGGAG (3) 2.3 0.0023 Cb medulloblastoma TTTTATTCTG (4) 2.3 0.0023 P8 GC+1d culture TGGAGCTGCC (3) 4.6 0.0046 P8 GC+1d culture AAGACACTTC (5) 2.3 0.0023 P8 GC+1d culture CCAGAAAAAA (8) 2.3 0.0023 P8 GC+1d culture ATTCAACACA (9) 1.1 0.0011 P8 GC+1d culture CCTTTAAACC (6) 1.1 0.0011 P8 GC+1d culture TTTTATTCTG (4) 1.1 0.0011 P8 GC+SHH+1d culture AAGACACTTC (5) 3.5 0.0035 P8 GC+SHH+1d culture GGTGGGAATG (6) 3.5 0.0035 P8 GC+SHH+1d culture TTTTATTCTG (4) 3.5 0.0035 P8 GC+SHH+1d culture ATTCAACACA (9) 1.2 0.0012 P8 GC+SHH+1d culture CCAGAAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture CCTTTAAACC (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGAGCTGCC (3) 1.2 0.0012 3T3 fibroblasts CCTTTAAACC (6) 3.5 0.0035 3T3 fibroblasts TGGAGCTGCC (3) 3.5 0.0035 E15 cortex CCAGAAAAAA (8) 4.9 0.0049 E15 cortex CCTTTAAACC (6) 4.9 0.0049 E15 cortex TGGAGCTGCC (3) 4.9 0.0049 P1 cortex AAGACACTTC (5) 4.5 0.0045 P1 cortex CCAGAAAAAA (8) 4.5 0.0045 Hypothalamus CCTTTAAACC (6) 1.8 0.0018 E12.5 retina ATTCAACACA (9) 1.9 0.0019 E12.5 retina CCTTTAAACC (6) 1.9 0.0019 E12.5 retina TGGAGCTGCC (3) 1.9 0.0019 E14.5 retina AAGACACTTC (5) 9.1 0.0091 E14.5 retina CCAGAAAAAA (8) 1.8 0.0018 E14.5 retina TTTTATTCTG (4) 1.8 0.0018 E16.5 retina AAGACACTTC (5) 7.2 0.0072 E16.5 retina ATTCAACACA (9) 1.8 0.0018 E16.5 retina TTCCCAGGAG (3) 1.8 0.0018 E18.5 retina AAGACACTTC (5) 9.1 0.0091 E18.5 retina TTTTATTCTG (4) 5.5 0.0055 E18.5 retina CCAGAAAAAA (8) 3.6 0.0036 E18.5 retina TGGAGCTGCC (3) 1.8 0.0018 P0.5 retina TTTTATTCTG (4) 3.9 0.0039 P0.5 retina ATTCAACACA (9) 2 0.002 P0.5 retina CCTTTAAACC (6) 2 0.002 P0.5 retina GGTGGGAATG (6) 2 0.002 P0.5 retina TGGAGCTGCC (3) 2 0.002 P2.5 retina GGTGGGAATG (6) 5.3 0.0053 P2.5 retina AAGACACTTC (5) 3.5 0.0035 P2.5 retina ATTCAACACA (9) 3.5 0.0035 P2.5 retina CCAGAAAAAA (8) 1.8 0.0018 P2.5 retina TGGAGCTGCC (3) 1.8 0.0018 P4.5 retina GGTGGGAATG (6) 5.9 0.0059 P4.5 retina AAGACACTTC (5) 4 0.004 P4.5 retina ATTCAACACA (9) 4 0.004 P4.5 retina TTTTATTCTG (4) 4 0.004 P4.5 retina CCTTTAAACC (6) 2 0.002 P4.5 retina TTCCCAGGAG (3) 2 0.002 P6.5 retina CCTTTAAACC (6) 3.3 0.0033 P6.5 retina AAGACACTTC (5) 1.7 0.0017 P6.5 retina CCAGAAAAAA (8) 1.7 0.0017 P6.5 retina TGGAGCTGCC (3) 1.7 0.0017 P6.5 retina TTTTATTCTG (4) 1.7 0.0017 P10.5 crx- retina AAGACACTTC (5) 1.9 0.0019 P10.5 crx- retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx- retina TGGAGCTGCC (3) 1.9 0.0019 P10.5 crx- retina TTCCCAGGAG (3) 1.9 0.0019 P10.5 crx+ retina AAGACACTTC (5) 5.8 0.0058 P10.5 crx+ retina TTTTATTCTG (4) 3.8 0.0038 P10.5 crx+ retina ATTCAACACA (9) 1.9 0.0019 P10.5 crx+ retina CCAGAAAAAA (8) 1.9 0.0019 Adult retinal TGGAGCTGCC (3) 3.7 0.0037 Adult retinal AAGACACTTC (5) 1.9 0.0019 Adult retinal CCAGAAAAAA (8) 1.9 0.0019