Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.165042	Ctdsp1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	1		227292
Gene Ontology	hydrolase activity | nucleus | phosphoprotein phosphatase activity
Human Homolog	CTDSP1[CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGATAAA (3) 24.5 0.0245 P8 Cb GC GCCCCCCGCT 1.6 0.0016 Cb medulloblastoma GACTGATAAA (3) 6.9 0.0069 Cb medulloblastoma GAGGACAGTG (4) 2.3 0.0023 Cb medulloblastoma GGGGGAGGGG (18) 2.3 0.0023 P8 GC+1d culture GACTGATAAA (3) 9.1 0.0091 P8 GC+1d culture GCCCCCCGCT 4.6 0.0046 P8 GC+1d culture GCACGAGCTC (2) 2.3 0.0023 P8 GC+1d culture GGGGGAGGGG (18) 2.3 0.0023 P8 GC+SHH+1d culture GACTGATAAA (3) 10.5 0.0105 P8 GC+SHH+1d culture GCCCCCCGCT 7 0.007 P8 GC+SHH+1d culture GCACGAGCTC (2) 1.2 0.0012 3T3 fibroblasts GCCCCCCGCT 31.5 0.0315 3T3 fibroblasts GGGGGAGGGG (18) 3.5 0.0035 E15 cortex GACTGATAAA (3) 14.8 0.0148 E15 cortex GCCCCCCGCT 4.9 0.0049 P1 cortex GACTGATAAA (3) 18.2 0.0182 P1 cortex GGGGGAGGGG (18) 4.5 0.0045 Hypothalamus GCACGAGCTC (2) 1.8 0.0018 Hypothalamus GCCCCCCGCT 1.8 0.0018 E12.5 retina GCACGAGCTC (2) 9.4 0.0094 E12.5 retina GGGGGAGGGG (18) 3.8 0.0038 E12.5 retina GCCCCCCGCT 1.9 0.0019 E14.5 retina GCACGAGCTC (2) 7.3 0.0073 E14.5 retina GACTGATAAA (3) 1.8 0.0018 E14.5 retina GAGGACAGTG (4) 1.8 0.0018 E14.5 retina GCCCCCCGCT 1.8 0.0018 E16.5 retina CAGGATGGAA (3) 1.8 0.0018 E18.5 retina CAGGATGGAA (3) 1.8 0.0018 E18.5 retina GACTGATAAA (3) 1.8 0.0018 E18.5 retina GCACGAGCTC (2) 1.8 0.0018 E18.5 retina GCCCCCCGCT 1.8 0.0018 E18.5 retina GGGGGAGGGG (18) 1.8 0.0018 P0.5 retina GCCCCCCGCT 2 0.002 P2.5 retina GACTGATAAA (3) 5.3 0.0053 P2.5 retina GCACGAGCTC (2) 3.5 0.0035 P2.5 retina GAGGACAGTG (4) 1.8 0.0018 P2.5 retina GCCCCCCGCT 1.8 0.0018 P2.5 retina GGGGGAGGGG (18) 1.8 0.0018 P4.5 retina GACTGATAAA (3) 7.9 0.0079 P4.5 retina GCACGAGCTC (2) 7.9 0.0079 P6.5 retina GCACGAGCTC (2) 5 0.005 P6.5 retina GCCCCCCGCT 3.3 0.0033 P6.5 retina CAGGATGGAA (3) 1.7 0.0017 P6.5 retina GACTGATAAA (3) 1.7 0.0017 P6.5 retina GGGGGAGGGG (18) 1.7 0.0017 P10.5 crx- retina GCCCCCCGCT 1.9 0.0019 P10.5 crx- retina GGGGGAGGGG (18) 1.9 0.0019 P10.5 crx+ retina CAGGATGGAA (3) 1.9 0.0019 P10.5 crx+ retina GCACGAGCTC (2) 1.9 0.0019 P10.5 crx+ retina GCCCCCCGCT 1.9 0.0019 P10.5 crx+ retina GGGGGAGGGG (18) 1.9 0.0019 Adult retinal GCCCCCCGCT 3.7 0.0037 Adult retinal GCACGAGCTC (2) 1.9 0.0019 Adult retinal GGGGGAGGGG (18) 1.9 0.0019