Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.168478
D730027C18Rik
RIKEN cDNA D730027C18 gene
2
319410
Mm.168478
4930432B04Rik
RIKEN cDNA 4930432B04 gene
2
75786
Human Homolog
ch-TOG[KIAA0097 gene product]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACAACTAA
(
2
)
6.5
0.0065
P8 Cb GC
TCAGAAGTTA
(
2
)
3.3
0.0033
P8 Cb GC
GGAGATGAGA (
6
)
1.6
0.0016
P8 Cb GC
GGCAGATGGA (
5
)
1.6
0.0016
Cb medulloblastoma
AGACAACTAA
(
2
)
16.2
0.0162
Cb medulloblastoma
CAAGCAAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
AGACAACTAA
(
2
)
8
0.008
P8 GC+1d culture
CTAGAAAAGG
(
2
)
1.1
0.0011
P8 GC+1d culture
CTCTGCTTCT
(
4
)
1.1
0.0011
P8 GC+1d culture
GGAGATGAGA (
6
)
1.1
0.0011
P8 GC+1d culture
TGTGCCACCC (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AGACAACTAA
(
2
)
12.9
0.0129
P8 GC+SHH+1d culture
GGAGATGAGA (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GGCAGATGGA (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
CTCTGCTTCT
(
4
)
2.3
0.0023
3T3 fibroblasts
CAGAGTGGCT
(
2
)
3.5
0.0035
3T3 fibroblasts
TGTGCCACCC (
4
)
3.5
0.0035
E15 cortex
CAGAGTGGCT
(
2
)
4.9
0.0049
P1 cortex
AAAAACAATT (
5
)
4.5
0.0045
P1 cortex
AGACAACTAA
(
2
)
4.5
0.0045
P1 cortex
GGAGATGAGA (
6
)
4.5
0.0045
Hypothalamus
AGACAACTAA
(
2
)
7.2
0.0072
Hypothalamus
AAAAACAATT (
5
)
1.8
0.0018
Hypothalamus
TATTTGAAAT
(
3
)
1.8
0.0018
E12.5 retina
AGACAACTAA
(
2
)
18.8
0.0188
E12.5 retina
GGCAGATGGA (
5
)
1.9
0.0019
E14.5 retina
AGACAACTAA
(
2
)
10.9
0.0109
E14.5 retina
GGCAGATGGA (
5
)
7.3
0.0073
E14.5 retina
AAAAACAATT (
5
)
1.8
0.0018
E14.5 retina
TGCAGACTTG
(
2
)
1.8
0.0018
E16.5 retina
AGACAACTAA
(
2
)
19.9
0.0199
E16.5 retina
CTCTGCTTCT
(
4
)
1.8
0.0018
E16.5 retina
TGCAGACTTG
(
2
)
1.8
0.0018
E18.5 retina
AGACAACTAA
(
2
)
12.7
0.0127
E18.5 retina
CAAGCAAAAA (
5
)
1.8
0.0018
E18.5 retina
TATTTGAAAT
(
3
)
1.8
0.0018
P0.5 retina
AGACAACTAA
(
2
)
7.9
0.0079
P0.5 retina
CAAGCAAAAA (
5
)
2
0.002
P0.5 retina
GGCAGATGGA (
5
)
2
0.002
P0.5 retina
TGTGCCACCC (
4
)
2
0.002
P2.5 retina
AGACAACTAA
(
2
)
10.6
0.0106
P2.5 retina
ATTGAAAATA
(
2
)
1.8
0.0018
P2.5 retina
GGAGATGAGA (
6
)
1.8
0.0018
P2.5 retina
TGCAGACTTG
(
2
)
1.8
0.0018
P4.5 retina
AGACAACTAA
(
2
)
5.9
0.0059
P4.5 retina
CTCTGCTTCT
(
4
)
2
0.002
P4.5 retina
GGCAGATGGA (
5
)
2
0.002
P4.5 retina
TCAGAAGTTA
(
2
)
2
0.002
P4.5 retina
TGCAGACTTG
(
2
)
2
0.002
P6.5 retina
AGACAACTAA
(
2
)
8.3
0.0083
P6.5 retina
CTAGAAAAGG
(
2
)
1.7
0.0017
P10.5 crx- retina
AGACAACTAA
(
2
)
13
0.013
P10.5 crx- retina
TGTGCCACCC (
4
)
1.9
0.0019
P10.5 crx+ retina
AGACAACTAA
(
2
)
7.7
0.0077
P10.5 crx+ retina
CTCTGCTTCT
(
4
)
5.8
0.0058
Adult retinal
AGACAACTAA
(
2
)
3.7
0.0037
Adult retinal
CAGAGTGGCT
(
2
)
3.7
0.0037
ONL
AGACAACTAA
(
2
)
9.6
0.0096
ONL
CTAGAAAAGG
(
2
)
1.9
0.0019
ONL
GGAGATGAGA (
6
)
1.9
0.0019
