Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.170515	Nfkbia	nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha	12		18035
Gene Ontology	cytoplasm | cytosol | nucleus | protein binding | protein-nucleus import, translocation | regulation of cell proliferation
Human Homolog	NFKBIA[nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTTAAAAG (2) 3.3 0.0033 P8 Cb GC CTGCCGCGGG (2) 1.6 0.0016 P8 Cb GC GCCGGACAGC (2) 1.6 0.0016 Cb medulloblastoma GAACGTCATT (2) 2.3 0.0023 Cb medulloblastoma TGCACAAAAG (7) 2.3 0.0023 Cb medulloblastoma TGCTTAAAAG (2) 2.3 0.0023 P8 GC+1d culture TGCTTAAAAG (2) 9.1 0.0091 P8 GC+1d culture GGAGGACACA (3) 4.6 0.0046 P8 GC+1d culture AACCTTAAGA (2) 1.1 0.0011 P8 GC+1d culture GAACGTCATT (2) 1.1 0.0011 P8 GC+1d culture TGCTTAAAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGCTTAAAAG (2) 3.5 0.0035 P8 GC+SHH+1d culture GAAGTCATTG (3) 2.3 0.0023 P8 GC+SHH+1d culture GGAGGACACA (3) 2.3 0.0023 P8 GC+SHH+1d culture CAGGCCACCA (4) 1.2 0.0012 3T3 fibroblasts GAACGTCATT (2) 3.5 0.0035 3T3 fibroblasts GAAGTCATTG (3) 3.5 0.0035 E15 cortex GTGGAAAATG (8) 4.9 0.0049 P1 cortex TGCTTAAAAG (2) 4.5 0.0045 Hypothalamus CTGCCGCGGG (2) 1.8 0.0018 Hypothalamus GCCGGACAGC (2) 1.8 0.0018 E12.5 retina TGCTTAAAAG (2) 3.8 0.0038 E12.5 retina GAACGTCATT (2) 1.9 0.0019 E12.5 retina TGCTTAAAAA (2) 1.9 0.0019 E14.5 retina GAAGTCATTG (3) 3.6 0.0036 E14.5 retina GGAGGACACA (3) 1.8 0.0018 E14.5 retina TGCTTAAAAA (2) 1.8 0.0018 E16.5 retina TGCACAAAAG (7) 1.8 0.0018 E18.5 retina TGCTTAAAAG (2) 3.6 0.0036 E18.5 retina AACCTTAAGA (2) 1.8 0.0018 E18.5 retina CAGGCCACCA (4) 1.8 0.0018 E18.5 retina TGCTTAAAAA (2) 1.8 0.0018 P0.5 retina GAAGTCATTG (3) 3.9 0.0039 P0.5 retina TGCTTAAAAG (2) 2 0.002 P2.5 retina GAAGTCATTG (3) 1.8 0.0018 P2.5 retina TGCTTAAAAA (2) 1.8 0.0018 P4.5 retina TGCTTAAAAG (2) 2 0.002 P6.5 retina TGCTTAAAAG (2) 3.3 0.0033 P6.5 retina GGAGGACACA (3) 1.7 0.0017 P10.5 crx- retina GTGGAAAATG (8) 37.2 0.0372 P10.5 crx- retina TGCTTAAAAG (2) 11.1 0.0111 P10.5 crx- retina GAACGTCATT (2) 1.9 0.0019 P10.5 crx- retina GAAGTCATTG (3) 1.9 0.0019 P10.5 crx+ retina TGCTTAAAAG (2) 5.8 0.0058 P10.5 crx+ retina CTGCCGCGGG (2) 1.9 0.0019 P10.5 crx+ retina GAAGTCATTG (3) 1.9 0.0019 P10.5 crx+ retina GTGGAAAATG (8) 1.9 0.0019 Adult retinal GAAGTCATTG (3) 1.9 0.0019 Adult retinal GCCGGACAGC (2) 1.9 0.0019 Adult retinal GGAGGACACA (3) 1.9 0.0019 ONL CAGGCCACCA (4) 1.9 0.0019 ONL TGCACAAAAG (7) 1.9 0.0019