Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.171323	Ncoa6ip	nuclear receptor coactivator 6 interacting protein	4	4 0.0 cM	116940
Gene Ontology	cytoplasm | nucleus | protein binding | receptor activity | S-adenosylmethionine-dependent methyltransferase activity
Human Homolog	NCOA6IP[nuclear receptor coactivator 6 interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CAGAAACAGA (8) 2.3 0.0023 P8 GC+1d culture AGATCTTGCC 1.1 0.0011 P8 GC+SHH+1d culture GCAACCATCC (5) 2.3 0.0023 P8 GC+SHH+1d culture AGATCTTGCC 1.2 0.0012 P8 GC+SHH+1d culture CCCTCACACA (7) 1.2 0.0012 P8 GC+SHH+1d culture CCCTGATTGT (3) 1.2 0.0012 P8 GC+SHH+1d culture TATGAACTGA 1.2 0.0012 P8 GC+SHH+1d culture TCAATCTACC 1.2 0.0012 3T3 fibroblasts CCCTCACACA (7) 3.5 0.0035 E15 cortex CAGAAACAGA (8) 4.9 0.0049 P1 cortex AGATCTTGCC 9.1 0.0091 P1 cortex CCCTGATTGT (3) 4.5 0.0045 Hypothalamus AGATCTTGCC 1.8 0.0018 E12.5 retina AGATCTTGCC 3.8 0.0038 E12.5 retina TCTGTGGTGC (2) 3.8 0.0038 E12.5 retina CCCTGATTGT (3) 1.9 0.0019 E12.5 retina TATGAACTGA 1.9 0.0019 E12.5 retina TCAATCTACC 1.9 0.0019 E12.5 retina TGCATACAGT (3) 1.9 0.0019 E14.5 retina TCAATCTACC 1.8 0.0018 E14.5 retina TGATGTGGAA 1.8 0.0018 E16.5 retina TCAATCTACC 3.6 0.0036 E16.5 retina CCCTCACACA (7) 1.8 0.0018 E16.5 retina GCAACCATCC (5) 1.8 0.0018 E18.5 retina GTGGCCGAAA (5) 5.5 0.0055 E18.5 retina TGATGTGGAA 3.6 0.0036 P0.5 retina TCAATCTACC 3.9 0.0039 P0.5 retina GTGGCCGAAA (5) 2 0.002 P0.5 retina TGCATACAGT (3) 2 0.002 P2.5 retina GTGGCCGAAA (5) 10.6 0.0106 P2.5 retina TGCATACAGT (3) 1.8 0.0018 P4.5 retina GTGGCCGAAA (5) 7.9 0.0079 P4.5 retina CAGAAACAGA (8) 2 0.002 P4.5 retina CCCTGATTGT (3) 2 0.002 P4.5 retina GCAACCATCC (5) 2 0.002 P4.5 retina TGCATACAGT (3) 2 0.002 P6.5 retina GTGGCCGAAA (5) 3.3 0.0033 P6.5 retina CAGAAACAGA (8) 1.7 0.0017 P6.5 retina TCAATCTACC 1.7 0.0017 P10.5 crx- retina CAGAAACAGA (8) 1.9 0.0019 P10.5 crx- retina GTGGCCGAAA (5) 1.9 0.0019 P10.5 crx- retina TCAATCTACC 1.9 0.0019 P10.5 crx- retina TCTGTGGTGC (2) 1.9 0.0019 P10.5 crx+ retina GTGGCCGAAA (5) 7.7 0.0077 P10.5 crx+ retina TATGAACTGA 1.9 0.0019 Adult retinal GTGGCCGAAA (5) 3.7 0.0037 Adult retinal TCAATCTACC 3.7 0.0037 ONL GCAACCATCC (5) 3.8 0.0038 ONL GTGGCCGAAA (5) 3.8 0.0038 ONL TATGAACTGA 1.9 0.0019