Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.171374
1110032A03Rik
RIKEN cDNA 1110032A03 gene
9
68721
Gene Ontology
nucleus
Human Homolog
C11orf1[chromosome 11 open reading frame 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAAGTGTG
(
2
)
9.8
0.0098
P8 Cb GC
GCTGCTGTCT
(
4
)
8.2
0.0082
Cb medulloblastoma
GAGAAGTGTG
(
2
)
18.5
0.0185
Cb medulloblastoma
GCTGCTGTCT
(
4
)
6.9
0.0069
P8 GC+1d culture
GCTGCTGTCT
(
4
)
16
0.016
P8 GC+1d culture
GAGAAGTGTG
(
2
)
1.1
0.0011
P8 GC+1d culture
TCCAAACTGG (
3
)
1.1
0.0011
P8 GC+1d culture
TCCAAGTTTT
1.1
0.0011
P8 GC+SHH+1d culture
GCTGCTGTCT
(
4
)
14.1
0.0141
P8 GC+SHH+1d culture
GCTGCTGTTT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TCCAAGTTTT
1.2
0.0012
P8 GC+SHH+1d culture
TTTCACCTCG
(
3
)
1.2
0.0012
3T3 fibroblasts
GAGAAGTGTG
(
2
)
7
0.007
3T3 fibroblasts
GCTGCTGTCT
(
4
)
3.5
0.0035
3T3 fibroblasts
TCCAAACTGG (
3
)
3.5
0.0035
P1 cortex
GCTGCTGTCT
(
4
)
4.5
0.0045
Hypothalamus
GCTGCTGTCT
(
4
)
21.7
0.0217
Hypothalamus
TTTCACCTCG
(
3
)
3.6
0.0036
Hypothalamus
GCTGCTGTTT
(
3
)
1.8
0.0018
Hypothalamus
GCTGCTTTCT
(
5
)
1.8
0.0018
Hypothalamus
TCCAAACTGG (
3
)
1.8
0.0018
E12.5 retina
GCTGCTGTCT
(
4
)
3.8
0.0038
E12.5 retina
GAGAAGTGTG
(
2
)
1.9
0.0019
E16.5 retina
GCTGCTGTCT
(
4
)
14.5
0.0145
E16.5 retina
GAGAAGTGTG
(
2
)
3.6
0.0036
E18.5 retina
GCTGCTGTCT
(
4
)
10.9
0.0109
E18.5 retina
TCCAAGTTTT
1.8
0.0018
P0.5 retina
GCTGCTGTCT
(
4
)
13.7
0.0137
P0.5 retina
TCCAAACTGG (
3
)
5.9
0.0059
P2.5 retina
GCTGCTGTCT
(
4
)
8.8
0.0088
P2.5 retina
TCCAAACTGG (
3
)
1.8
0.0018
P4.5 retina
GCTGCTGTCT
(
4
)
11.9
0.0119
P4.5 retina
TGTTCCTTTC
(
2
)
2
0.002
P6.5 retina
GCTGCTGTCT
(
4
)
11.7
0.0117
P6.5 retina
TCCAAACTGG (
3
)
1.7
0.0017
P10.5 crx- retina
GCTGCTGTCT
(
4
)
18.6
0.0186
P10.5 crx- retina
GAGAAGTGTG
(
2
)
7.4
0.0074
P10.5 crx- retina
TCCAAACTGG (
3
)
5.6
0.0056
P10.5 crx+ retina
GAGAAGTGTG
(
2
)
42.3
0.0423
P10.5 crx+ retina
GCTGCTGTCT
(
4
)
23.1
0.0231
P10.5 crx+ retina
TCCAAACTGG (
3
)
3.8
0.0038
Adult retinal
GCTGCTGTCT
(
4
)
1.9
0.0019
Adult retinal
GCTGCTGTTT
(
3
)
1.9
0.0019
Adult retinal
TCCAAACTGG (
3
)
1.9
0.0019
ONL
GCTGCTGTCT
(
4
)
9.6
0.0096
ONL
TGTTCCTTTC
(
2
)
3.8
0.0038
ONL
GAGAAGTGTG
(
2
)
1.9
0.0019
ONL
TCCAAACTGG (
3
)
1.9
0.0019
