Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.171469	6820402O20Rik	RIKEN cDNA 6820402O20 gene	2		228829
Gene Ontology	DNA binding | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | zinc ion binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAACTTCTG (2) 3.3 0.0033 P8 Cb GC TACAGACTCG (5) 3.3 0.0033 P8 Cb GC ATGAGGCTGG (3) 1.6 0.0016 P8 Cb GC GCAAACTACT (4) 1.6 0.0016 Cb medulloblastoma CAAACTTCTG (2) 16.2 0.0162 Cb medulloblastoma GGGACAAAGA (4) 2.3 0.0023 Cb medulloblastoma GTGGTCAGGG (8) 2.3 0.0023 P8 GC+1d culture CAAACTTCTG (2) 8 0.008 P8 GC+1d culture GAAATACATT (2) 2.3 0.0023 P8 GC+1d culture GTCTGGCATT (4) 1.1 0.0011 P8 GC+SHH+1d culture CAAACTTCTG (2) 5.9 0.0059 P8 GC+SHH+1d culture TACAGACTCG (5) 2.3 0.0023 P8 GC+SHH+1d culture ATGAGGCTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAATACATT (2) 1.2 0.0012 3T3 fibroblasts TACAGACTCG (5) 10.5 0.0105 3T3 fibroblasts GCCACCTGCC (5) 3.5 0.0035 3T3 fibroblasts GGGACAAAGA (4) 3.5 0.0035 E15 cortex CAAACTTCTG (2) 4.9 0.0049 P1 cortex CAAACTTCTG (2) 9.1 0.0091 Hypothalamus CAAACTTCTG (2) 7.2 0.0072 Hypothalamus GTGGTCAGGG (8) 1.8 0.0018 Hypothalamus TACAGACTCG (5) 1.8 0.0018 E12.5 retina CAAACTTCTG (2) 3.8 0.0038 E12.5 retina GTCTGGCATT (4) 1.9 0.0019 E14.5 retina CAAACTTCTG (2) 3.6 0.0036 E16.5 retina CAAACTTCTG (2) 7.2 0.0072 E16.5 retina GAAATACATT (2) 1.8 0.0018 E18.5 retina CAAACTTCTG (2) 12.7 0.0127 E18.5 retina GTGGTCAGGG (8) 1.8 0.0018 P0.5 retina CAAACTTCTG (2) 5.9 0.0059 P0.5 retina ATGAGGCTGG (3) 2 0.002 P0.5 retina GGGACAAAGA (4) 2 0.002 P2.5 retina CAAACTTCTG (2) 5.3 0.0053 P2.5 retina ATGAGGCTGG (3) 1.8 0.0018 P4.5 retina GTGGTCAGGG (8) 2 0.002 P6.5 retina CAAACTTCTG (2) 3.3 0.0033 P6.5 retina GCCACCTGCC (5) 1.7 0.0017 P10.5 crx- retina CAAACTTCTG (2) 5.6 0.0056 P10.5 crx- retina GCAAACTACT (4) 3.7 0.0037 P10.5 crx- retina ATGAGGCTGG (3) 1.9 0.0019 P10.5 crx- retina TACAGACTCG (5) 1.9 0.0019 P10.5 crx+ retina CAAACTTCTG (2) 7.7 0.0077 Adult retinal CAAACTTCTG (2) 3.7 0.0037 Adult retinal GCCACCTGCC (5) 1.9 0.0019 Adult retinal GTCTGGCATT (4) 1.9 0.0019 ONL CAAACTTCTG (2) 9.6 0.0096 ONL GCCACCTGCC (5) 3.8 0.0038 ONL GTGGTCAGGG (8) 1.9 0.0019