Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.17166
Arid2
AT rich interactive domain 2 (Arid-rfx like)
15
77044
Mm.17166
1700124K17Rik
RIKEN cDNA 1700124K17 gene
15
73642
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 94 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGCTGAGAG
(
3
)
9.8
0.0098
P8 Cb GC
GAATTTTATA
(
3
)
1.6
0.0016
P8 Cb GC
GCCACAGCCT (
4
)
1.6
0.0016
P8 Cb GC
TATTTAAACC
(
3
)
1.6
0.0016
P8 Cb GC
TGTGGGTTGG
(
3
)
1.6
0.0016
Cb medulloblastoma
GGGCTGCCCA (
7
)
9.2
0.0092
Cb medulloblastoma
ATGCTGAGAG
(
3
)
4.6
0.0046
Cb medulloblastoma
CTGACTTCCA (
2
)
2.3
0.0023
P8 GC+1d culture
ATGCTGAGAG
(
3
)
3.4
0.0034
P8 GC+1d culture
CTGCCCCCCC
(
5
)
3.4
0.0034
P8 GC+1d culture
GAATTTTATA
(
3
)
3.4
0.0034
P8 GC+1d culture
TGTGGCTTGG
(
10
)
2.3
0.0023
P8 GC+1d culture
GAAGCTTCCT
(
2
)
1.1
0.0011
P8 GC+1d culture
TATTTAAACC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGCTGAGAG
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GAATTTTATA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTTAAACC
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGCCCCCCC
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCACAGCCT (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TATGTTTTTT
(
4
)
1.2
0.0012
3T3 fibroblasts
GCCACAGCCT (
4
)
21
0.021
3T3 fibroblasts
GGGCTGCCCA (
7
)
3.5
0.0035
3T3 fibroblasts
TGTGGGTTGG
(
3
)
3.5
0.0035
E15 cortex
GCCACAGCCT (
4
)
9.9
0.0099
E15 cortex
ATGCTGAGAG
(
3
)
4.9
0.0049
E15 cortex
TATGTTTTTT
(
4
)
4.9
0.0049
Hypothalamus
GCCACAGCCT (
4
)
3.6
0.0036
Hypothalamus
ATGCTGAGAG
(
3
)
1.8
0.0018
Hypothalamus
TGTGGGTTGG
(
3
)
1.8
0.0018
E12.5 retina
ATGCTGAGAG
(
3
)
9.4
0.0094
E12.5 retina
TGTGGGTTGG
(
3
)
5.6
0.0056
E12.5 retina
GCCACAGCCT (
4
)
1.9
0.0019
E12.5 retina
TATGTTTTTT
(
4
)
1.9
0.0019
E12.5 retina
TATTTAAACC
(
3
)
1.9
0.0019
E14.5 retina
ATGCTGAGAG
(
3
)
5.5
0.0055
E14.5 retina
CTGACTTCCA (
2
)
3.6
0.0036
E14.5 retina
GAAGCTTCCT
(
2
)
1.8
0.0018
E14.5 retina
GAGGAAAAGA
(
5
)
1.8
0.0018
E14.5 retina
GAGGACACAA (
4
)
1.8
0.0018
E16.5 retina
ATGCTGAGAG
(
3
)
9.1
0.0091
E16.5 retina
GAATTTTATA
(
3
)
1.8
0.0018
E16.5 retina
GCCACAGCCT (
4
)
1.8
0.0018
E16.5 retina
TATGTTTTTT
(
4
)
1.8
0.0018
E16.5 retina
TATTTAAACC
(
3
)
1.8
0.0018
E16.5 retina
TGTGGCTTGG
(
10
)
1.8
0.0018
E18.5 retina
ATGCTGAGAG
(
3
)
7.3
0.0073
E18.5 retina
GAATTTTATA
(
3
)
1.8
0.0018
E18.5 retina
GCCACAGCCT (
4
)
1.8
0.0018
E18.5 retina
TGTGGGTTGG
(
3
)
1.8
0.0018
P0.5 retina
ATGCTGAGAG
(
3
)
3.9
0.0039
P0.5 retina
GCCACAGCCT (
4
)
3.9
0.0039
P0.5 retina
TGTGGGTTGG
(
3
)
3.9
0.0039
P0.5 retina
GAATAGTGTA
(
2
)
2
0.002
P0.5 retina
GGGCTGCCCA (
7
)
2
0.002
P0.5 retina
TATTTAAACC
(
3
)
2
0.002
P2.5 retina
ATGCTGAGAG
(
3
)
12.3
0.0123
P2.5 retina
TATGTTTTTT
(
4
)
5.3
0.0053
P2.5 retina
GAGGACACAA (
4
)
3.5
0.0035
P2.5 retina
GCCACAGCCT (
4
)
3.5
0.0035
P2.5 retina
TGTGGCTTGG
(
10
)
3.5
0.0035
P2.5 retina
TGTGGGTTGG
(
3
)
3.5
0.0035
P2.5 retina
GAAGCTTCCT
(
2
)
1.8
0.0018
P2.5 retina
TATTTAAACC
(
3
)
1.8
0.0018
P4.5 retina
TATGTTTTTT
(
4
)
9.9
0.0099
P4.5 retina
ATGCTGAGAG
(
3
)
7.9
0.0079
P4.5 retina
GAATAGTGTA
(
2
)
4
0.004
P4.5 retina
TGTGGGTTGG
(
3
)
4
0.004
P4.5 retina
GAATTTTATA
(
3
)
2
0.002
P4.5 retina
GAGGAAAAGA
(
5
)
2
0.002
P4.5 retina
GAGGGGGTGG (
5
)
2
0.002
P6.5 retina
TGTGGGTTGG
(
3
)
6.7
0.0067
P6.5 retina
ATGCTGAGAG
(
3
)
5
0.005
P10.5 crx- retina
ATGCTGAGAG
(
3
)
14.9
0.0149
P10.5 crx- retina
GCCACAGCCT (
4
)
5.6
0.0056
P10.5 crx- retina
GAATAGTGTA
(
2
)
1.9
0.0019
P10.5 crx- retina
TATGTTTTTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
ATGCTGAGAG
(
3
)
3.8
0.0038
P10.5 crx+ retina
TGTGGGTTGG
(
3
)
3.8
0.0038
P10.5 crx+ retina
GAGGACACAA (
4
)
1.9
0.0019
P10.5 crx+ retina
GCCACAGCCT (
4
)
1.9
0.0019
P10.5 crx+ retina
GGGCTGCCCA (
7
)
1.9
0.0019
P10.5 crx+ retina
TATGTTTTTT
(
4
)
1.9
0.0019
Adult retinal
TGTGGGTTGG
(
3
)
3.7
0.0037
Adult retinal
ATGCTGAGAG
(
3
)
1.9
0.0019
Adult retinal
GAGGGGGTGG (
5
)
1.9
0.0019
Adult retinal
GCCACAGCCT (
4
)
1.9
0.0019
Adult retinal
GGGCTGCCCA (
7
)
1.9
0.0019
Adult retinal
TATGTTTTTT
(
4
)
1.9
0.0019
ONL
GAGGGGGTGG (
5
)
3.8
0.0038
ONL
ATGCTGAGAG
(
3
)
1.9
0.0019
ONL
GAGGAAAAGA
(
5
)
1.9
0.0019
ONL
GCCACAGCCT (
4
)
1.9
0.0019
ONL
TATTTAAACC
(
3
)
1.9
0.0019
ONL
TGTGGGTTGG
(
3
)
1.9
0.0019
