Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.173392	C77266	expressed sequence C77266	5		97215
Mm.173392	Cacna2d1	calcium channel, voltage-dependent, alpha2/delta subunit 1	5	5 4.0 cM	12293
Gene Ontology	calcium channel activity | extracellular space | integral to membrane | ion channel activity | ion transport | membrane | voltage-gated ion channel activity
Human Homolog	CACNA2D1[calcium channel, voltage-dependent, alpha 2/delta subunit 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTGTAAAA (4) 3.3 0.0033 P8 Cb GC AAATGCTCAT (2) 1.6 0.0016 Cb medulloblastoma CCTTGTAAAA (4) 11.6 0.0116 Cb medulloblastoma AACACATTTT (5) 2.3 0.0023 P8 GC+1d culture AAGAAAATCC (5) 1.1 0.0011 P8 GC+1d culture CCTTGTAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTTGTAAAA (4) 7 0.007 P8 GC+SHH+1d culture GTTCTTTTAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AAATGCTCAT (2) 1.2 0.0012 E15 cortex CCTTGTAAAA (4) 4.9 0.0049 E15 cortex GTTCTTTTAA (3) 4.9 0.0049 P1 cortex AACACATTTT (5) 9.1 0.0091 P1 cortex CCTTGTAAAA (4) 4.5 0.0045 Hypothalamus AAGAAAATCC (5) 1.8 0.0018 E12.5 retina AACACATTTT (5) 1.9 0.0019 E12.5 retina CCTTGTAAAA (4) 1.9 0.0019 E14.5 retina CCTTGTAAAA (4) 14.6 0.0146 E14.5 retina GTTCTTTTAA (3) 1.8 0.0018 E16.5 retina CCTTGTAAAA (4) 3.6 0.0036 E18.5 retina CCTTGTAAAA (4) 9.1 0.0091 E18.5 retina AAGAAAATCC (5) 1.8 0.0018 P0.5 retina CCTTGTAAAA (4) 9.8 0.0098 P0.5 retina AAGAAAATCC (5) 2 0.002 P2.5 retina CCTTGTAAAA (4) 7 0.007 P2.5 retina GTTCTTTTAA (3) 1.8 0.0018 P4.5 retina CCTTGTAAAA (4) 7.9 0.0079 P10.5 crx- retina CCTTGTAAAA (4) 7.4 0.0074 P10.5 crx- retina AAATGCTCAT (2) 3.7 0.0037 P10.5 crx+ retina CCTTGTAAAA (4) 3.8 0.0038 P10.5 crx+ retina GTTCTTTTAA (3) 1.9 0.0019 Adult retinal AAATGCTCAT (2) 1.9 0.0019 ONL CCTTGTAAAA (4) 1.9 0.0019