Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17537	Cxxc1	CXXC finger 1 (PHD domain)	18		74322
Gene Ontology	DNA binding | nuclear matrix | nucleus | regulation of transcription, DNA-dependent | zinc ion binding
Human Homolog	CXXC1[CXXC finger 1 (PHD domain)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGAAGCC (6) 3.3 0.0033 P8 Cb GC CTTGCTCGGG (3) 1.6 0.0016 P8 GC+1d culture GACTGAAGCC (6) 4.6 0.0046 P8 GC+1d culture ACCAACAGAG (4) 2.3 0.0023 P8 GC+1d culture GCCACTGCCT (7) 2.3 0.0023 P8 GC+1d culture CTTGCTCGGG (3) 1.1 0.0011 P8 GC+1d culture GAAGGGCCAA (7) 1.1 0.0011 P8 GC+1d culture GCTTGGGGGC (5) 1.1 0.0011 P8 GC+SHH+1d culture GCCACTGCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture GAAGGGCCAA (7) 2.3 0.0023 P8 GC+SHH+1d culture ACCAACAGAG (4) 1.2 0.0012 3T3 fibroblasts GAAGGGCCAA (7) 10.5 0.0105 3T3 fibroblasts GCCACTGCCT (7) 7 0.007 3T3 fibroblasts CCTGGGCTGG 3.5 0.0035 E15 cortex ACCAACAGAG (4) 4.9 0.0049 E15 cortex GAAGGGCCAA (7) 4.9 0.0049 Hypothalamus CTTGCTCGGG (3) 3.6 0.0036 Hypothalamus GACTGAAGCC (6) 3.6 0.0036 Hypothalamus ACCAACAGAG (4) 1.8 0.0018 Hypothalamus GCCACTGCCT (7) 1.8 0.0018 E12.5 retina CTTGCTCGGG (3) 3.8 0.0038 E12.5 retina GAAGGGCCAA (7) 1.9 0.0019 E12.5 retina GAGACTGCAT (3) 1.9 0.0019 E12.5 retina GCCACTGCCT (7) 1.9 0.0019 E14.5 retina ACCAACAGAG (4) 1.8 0.0018 E14.5 retina GAAGGGCCAA (7) 1.8 0.0018 E16.5 retina ACCAACAGAG (4) 5.4 0.0054 E16.5 retina GCCACTGCCT (7) 5.4 0.0054 E16.5 retina GCTTGGGGGC (5) 3.6 0.0036 E18.5 retina GAAGGGCCAA (7) 1.8 0.0018 E18.5 retina GCCACTGCCT (7) 1.8 0.0018 P0.5 retina GAAGGGCCAA (7) 5.9 0.0059 P0.5 retina GCCACTGCCT (7) 2 0.002 P2.5 retina GAAGGGCCAA (7) 7 0.007 P2.5 retina ACCAACAGAG (4) 3.5 0.0035 P4.5 retina GCCACTGCCT (7) 5.9 0.0059 P4.5 retina GAGACTGCAT (3) 4 0.004 P4.5 retina CTTGCTCGGG (3) 2 0.002 P6.5 retina GCCACTGCCT (7) 5 0.005 P6.5 retina ACCAACAGAG (4) 1.7 0.0017 P10.5 crx- retina GCCACTGCCT (7) 3.7 0.0037 P10.5 crx- retina GAAGGGCCAA (7) 1.9 0.0019 P10.5 crx+ retina GCCACTGCCT (7) 5.8 0.0058 P10.5 crx+ retina GAAGGGCCAA (7) 1.9 0.0019 Adult retinal ACCAACAGAG (4) 9.3 0.0093 Adult retinal CTTGCTCGGG (3) 1.9 0.0019 Adult retinal GCTTGGGGGC (5) 1.9 0.0019 ONL ACCAACAGAG (4) 1.9 0.0019 ONL CCTGGGCTGG 1.9 0.0019