Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.175989
2700055A20Rik
RIKEN cDNA 2700055A20 gene
19
69104
Human Homolog
RNF153[ring finger protein 153]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 96 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGACATCTCA
(
4
)
9.8
0.0098
P8 Cb GC
GGAAACCTGA
(
4
)
3.3
0.0033
P8 Cb GC
TTTTATTTTG (
8
)
3.3
0.0033
P8 Cb GC
TTTTAAAAAA (
26
)
1.6
0.0016
P8 Cb GC
TTTTATTCTT
(
2
)
1.6
0.0016
Cb medulloblastoma
TTTTAAAAAA (
26
)
9.2
0.0092
Cb medulloblastoma
TTTTATTTTG (
8
)
6.9
0.0069
Cb medulloblastoma
TGACATCTCA
(
4
)
4.6
0.0046
Cb medulloblastoma
CAAGAGACAG (
4
)
2.3
0.0023
Cb medulloblastoma
TTTTATTCTG
(
4
)
2.3
0.0023
P8 GC+1d culture
TTTTATTCTT
(
2
)
11.4
0.0114
P8 GC+1d culture
TTTTATTTTG (
8
)
9.1
0.0091
P8 GC+1d culture
TGACATCTCA
(
4
)
5.7
0.0057
P8 GC+1d culture
GGAAACCTGA
(
4
)
2.3
0.0023
P8 GC+1d culture
TTTTAAAAAA (
26
)
2.3
0.0023
P8 GC+1d culture
TTTTATTCTG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTATTCTT
(
2
)
16.4
0.0164
P8 GC+SHH+1d culture
TTTTAAAAAA (
26
)
10.5
0.0105
P8 GC+SHH+1d culture
TGACATCTCA
(
4
)
8.2
0.0082
P8 GC+SHH+1d culture
TTTTATTTTG (
8
)
5.9
0.0059
P8 GC+SHH+1d culture
TTTTATTCTG
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
CAAGAGACAG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GGTTTAGGAA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAAACCTGA
(
4
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GGAAACCTGA
(
4
)
3.5
0.0035
3T3 fibroblasts
TGACATCTCA
(
4
)
3.5
0.0035
E15 cortex
GGAAACCTGA
(
4
)
9.9
0.0099
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TTTTATTTTG (
8
)
31.8
0.0318
P1 cortex
TGACATCTCA
(
4
)
4.5
0.0045
P1 cortex
TTTTAAAAAA (
26
)
4.5
0.0045
Hypothalamus
TTTTATTTTG (
8
)
9.1
0.0091
Hypothalamus
TGACATCTCA
(
4
)
3.6
0.0036
Hypothalamus
TTTTAAAAAA (
26
)
1.8
0.0018
Hypothalamus
TTTTATTCTT
(
2
)
1.8
0.0018
E12.5 retina
CAAGAGACAG (
4
)
3.8
0.0038
E12.5 retina
TGACATCTCA
(
4
)
3.8
0.0038
E12.5 retina
TTTTAAAAAA (
26
)
1.9
0.0019
E12.5 retina
TTTTATTCTT
(
2
)
1.9
0.0019
E14.5 retina
TTTTATTCTT
(
2
)
7.3
0.0073
E14.5 retina
TGACATCTCA
(
4
)
5.5
0.0055
E14.5 retina
CAAGAGACAG (
4
)
3.6
0.0036
E14.5 retina
TTTTAAAAAA (
26
)
3.6
0.0036
E14.5 retina
TTTTATTCTG
(
4
)
1.8
0.0018
E16.5 retina
TTTTATTCTT
(
2
)
7.2
0.0072
E16.5 retina
TTTTATTTTG (
8
)
5.4
0.0054
E16.5 retina
CAAGAGACAG (
4
)
1.8
0.0018
E18.5 retina
TTTTATTCTT
(
2
)
16.4
0.0164
E18.5 retina
TTTTAAAAAA (
26
)
9.1
0.0091
E18.5 retina
TTTTATTCTG
(
4
)
5.5
0.0055
E18.5 retina
TTTTATTTTG (
8
)
5.5
0.0055
E18.5 retina
TGACATCTCA
(
4
)
3.6
0.0036
E18.5 retina
CAAGAGACAG (
4
)
1.8
0.0018
E18.5 retina
GGAAACCTGA
(
4
)
1.8
0.0018
E18.5 retina
GGTTTAGGAA
(
2
)
1.8
0.0018
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TGACATCTCA
(
4
)
3.9
0.0039
P0.5 retina
TTTTATTCTG
(
4
)
3.9
0.0039
P0.5 retina
GGAAACCTGA
(
4
)
2
0.002
P2.5 retina
TGACATCTCA
(
4
)
7
0.007
P2.5 retina
TTTTAAAAAA (
26
)
5.3
0.0053
P2.5 retina
TTTTATTTTG (
8
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
TTTTATTCTT
(
2
)
7.9
0.0079
P4.5 retina
TGACATCTCA
(
4
)
4
0.004
P4.5 retina
TTTTAAAAAA (
26
)
4
0.004
P4.5 retina
TTTTATTCTG
(
4
)
4
0.004
P4.5 retina
TTTTATTTTG (
8
)
4
0.004
P4.5 retina
CAAGAGACAG (
4
)
2
0.002
P4.5 retina
GGTTTAGGAA
(
2
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TTTTATTTTG (
8
)
6.7
0.0067
P6.5 retina
TGACATCTCA
(
4
)
5
0.005
P6.5 retina
TTTTAAAAAA (
26
)
5
0.005
P6.5 retina
CAAGAGACAG (
4
)
3.3
0.0033
P6.5 retina
GGAAACCTGA
(
4
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TTTTATTCTG
(
4
)
1.7
0.0017
P10.5 crx- retina
TTTTATTTTG (
8
)
7.4
0.0074
P10.5 crx- retina
TGACATCTCA
(
4
)
3.7
0.0037
P10.5 crx- retina
TTTTATTCTT
(
2
)
3.7
0.0037
P10.5 crx- retina
GGAAACCTGA
(
4
)
1.9
0.0019
P10.5 crx- retina
TTTTAAAAAA (
26
)
1.9
0.0019
P10.5 crx+ retina
TGACATCTCA
(
4
)
13.5
0.0135
P10.5 crx+ retina
TTTTATTCTG
(
4
)
3.8
0.0038
P10.5 crx+ retina
TTTTAAAAAA (
26
)
1.9
0.0019
P10.5 crx+ retina
TTTTATTTTG (
8
)
1.9
0.0019
Adult retinal
TTTTATTTTG (
8
)
9.3
0.0093
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGACATCTCA
(
4
)
1.9
0.0019
Adult retinal
TTTTATTCTT
(
2
)
1.9
0.0019
ONL
TTTTATTTTG (
8
)
7.7
0.0077
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TGACATCTCA
(
4
)
3.8
0.0038
ONL
TTTTAAAAAA (
26
)
3.8
0.0038
