Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1773	Sh3gl1	SH3-domain GRB2-like 1	17	17 35.0 cM	20405
Gene Ontology	cytoplasm | endocytosis | membrane | protein binding
Human Homolog	SH3GL1[SH3-domain GRB2-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCCACGTGC 9.8 0.0098 P8 Cb GC GAAGGGCCAG (10) 3.3 0.0033 P8 Cb GC TTCCAGTAAT 1.6 0.0016 Cb medulloblastoma TGCCACGTGC 11.6 0.0116 Cb medulloblastoma GCAGGGTGAG (4) 2.3 0.0023 P8 GC+1d culture TGCCACGTGC 20.5 0.0205 P8 GC+1d culture TTCCAGTAAT 3.4 0.0034 P8 GC+1d culture GAAGGGCCAG (10) 1.1 0.0011 P8 GC+1d culture GCAGGGTGAG (4) 1.1 0.0011 P8 GC+SHH+1d culture TGCCACGTGC 21.1 0.0211 P8 GC+SHH+1d culture TTCCAGTAAT 3.5 0.0035 P8 GC+SHH+1d culture GAAGGGCCAG (10) 2.3 0.0023 P8 GC+SHH+1d culture GCAGGGTGAG (4) 1.2 0.0012 3T3 fibroblasts TGCCACGTGC 14 0.014 3T3 fibroblasts GAAGGGCCAG (10) 3.5 0.0035 3T3 fibroblasts GCCCCTGTGC (2) 3.5 0.0035 E15 cortex TGCCACGTGC 24.7 0.0247 E15 cortex GAAGGGCCAG (10) 14.8 0.0148 E15 cortex TTCCAGTAAT 4.9 0.0049 P1 cortex TGCCACGTGC 4.5 0.0045 Hypothalamus TGACTGAAGG (9) 1.8 0.0018 Hypothalamus TGCCACGTGC 1.8 0.0018 E12.5 retina TGCCACGTGC 7.5 0.0075 E12.5 retina GAAGGGCCAG (10) 3.8 0.0038 E12.5 retina GCAGGGTGAG (4) 1.9 0.0019 E12.5 retina TGACTGAAGG (9) 1.9 0.0019 E12.5 retina TTCCAGTAAT 1.9 0.0019 E14.5 retina TGCCACGTGC 7.3 0.0073 E14.5 retina GAAGGGCCAG (10) 5.5 0.0055 E14.5 retina GCAGGGTGAG (4) 3.6 0.0036 E14.5 retina TTCCAGTAAT 1.8 0.0018 E16.5 retina TGCCACGTGC 10.9 0.0109 E16.5 retina TTCCAGTAAT 5.4 0.0054 E16.5 retina GCAGGGTGAG (4) 1.8 0.0018 E18.5 retina TGCCACGTGC 3.6 0.0036 E18.5 retina GAAGGGCCAG (10) 1.8 0.0018 E18.5 retina TTCCAGTAAT 1.8 0.0018 P0.5 retina TGCCACGTGC 17.7 0.0177 P0.5 retina TTCCAGTAAT 5.9 0.0059 P0.5 retina GAAGGGCCAG (10) 3.9 0.0039 P0.5 retina GGAAGTGTAC (2) 3.9 0.0039 P0.5 retina GCCCCTGTGC (2) 2 0.002 P0.5 retina TGACTGAAGG (9) 2 0.002 P2.5 retina TGCCACGTGC 10.6 0.0106 P2.5 retina GAAGGGCCAG (10) 5.3 0.0053 P2.5 retina GCCCCTGTGC (2) 1.8 0.0018 P2.5 retina GGAAGTGTAC (2) 1.8 0.0018 P4.5 retina TGCCACGTGC 7.9 0.0079 P4.5 retina TTCCAGTAAT 7.9 0.0079 P4.5 retina GAAGGGCCAG (10) 4 0.004 P4.5 retina TGACTGAAGG (9) 2 0.002 P6.5 retina TGCCACGTGC 6.7 0.0067 P6.5 retina TTCCAGTAAT 3.3 0.0033 P6.5 retina GAAGGGCCAG (10) 1.7 0.0017 P6.5 retina GCCCCTGTGC (2) 1.7 0.0017 P10.5 crx- retina TGCCACGTGC 7.4 0.0074 P10.5 crx- retina TTCCAGTAAT 7.4 0.0074 P10.5 crx+ retina TGCCACGTGC 9.6 0.0096 Adult retinal TGCCACGTGC 7.4 0.0074 Adult retinal GCCCCTGTGC (2) 1.9 0.0019 Adult retinal TGACTGAAGG (9) 1.9 0.0019 Adult retinal TTCCAGTAAT 1.9 0.0019 ONL TGCCACGTGC 3.8 0.0038 ONL GCCCCTGTGC (2) 1.9 0.0019