Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1775	AL117934	expressed sequence AL117934	11		404584
Mm.1775	Hn1	hematological and neurological expressed sequence 1	11	11 70.0 cM	15374
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	HN1[hematological and neurological expressed 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAAAGTCT (4) 32.6 0.0326 P8 Cb GC CTTGGGAACT (2) 29.4 0.0294 P8 Cb GC AAAATGTGGA (3) 1.6 0.0016 P8 Cb GC GAGAAAGTCC (4) 1.6 0.0016 P8 Cb GC GCACTTCTTC (4) 1.6 0.0016 P8 Cb GC GGTTCAAGCC (3) 1.6 0.0016 Cb medulloblastoma GAATGGTTTT (2) 6.9 0.0069 Cb medulloblastoma GCACAGGAAG (2) 2.3 0.0023 P8 GC+1d culture GAGAAAGTCT (4) 77.6 0.0776 P8 GC+1d culture CTTGGGAACT (2) 37.7 0.0377 P8 GC+1d culture CATATCACCT (2) 3.4 0.0034 P8 GC+1d culture GAGAAAGTCC (4) 2.3 0.0023 P8 GC+1d culture AAAATGTGGA (3) 1.1 0.0011 P8 GC+1d culture GAGAAAGTTT (5) 1.1 0.0011 P8 GC+1d culture GCACTTCTTC (4) 1.1 0.0011 P8 GC+SHH+1d culture GAGAAAGTCT (4) 63.2 0.0632 P8 GC+SHH+1d culture CTTGGGAACT (2) 31.6 0.0316 P8 GC+SHH+1d culture AGTGTTTTCT (8) 3.5 0.0035 P8 GC+SHH+1d culture CATATCACCT (2) 1.2 0.0012 P8 GC+SHH+1d culture GCACAGGAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAGGGAA (14) 1.2 0.0012 P8 GC+SHH+1d culture GGTTCAAGCC (3) 1.2 0.0012 3T3 fibroblasts GAGAAAGTCT (4) 7 0.007 3T3 fibroblasts CTTGGGAACT (2) 3.5 0.0035 E15 cortex GAGAAAGTCT (4) 59.4 0.0594 E15 cortex CTTGGGAACT (2) 29.7 0.0297 E15 cortex GAGAAAGTTT (5) 4.9 0.0049 P1 cortex GAGAAAGTCT (4) 13.6 0.0136 P1 cortex CTTGGGAACT (2) 4.5 0.0045 Hypothalamus GAGAAAGTCT (4) 9.1 0.0091 Hypothalamus GAGACAGTCT (3) 3.6 0.0036 Hypothalamus CTTGGGAACT (2) 1.8 0.0018 Hypothalamus GAATGGTTTT (2) 1.8 0.0018 Hypothalamus GGAGCAGGGT (3) 1.8 0.0018 E12.5 retina GAGAAAGTCT (4) 58.2 0.0582 E12.5 retina CTTGGGAACT (2) 13.1 0.0131 E12.5 retina AGTGTTTTCT (8) 1.9 0.0019 E12.5 retina GGAGCAGGGT (3) 1.9 0.0019 E12.5 retina GGGAAGGGAA (14) 1.9 0.0019 E14.5 retina GAGAAAGTCT (4) 40.1 0.0401 E14.5 retina AGTGTTTTCT (8) 5.5 0.0055 E14.5 retina CTTGGGAACT (2) 5.5 0.0055 E14.5 retina GCACTTCTTC (4) 3.6 0.0036 E14.5 retina GCACAGGAAG (2) 1.8 0.0018 E14.5 retina GCCCAGGAAG (8) 1.8 0.0018 E16.5 retina GAGAAAGTCT (4) 50.7 0.0507 E16.5 retina CTTGGGAACT (2) 29 0.029 E16.5 retina AGTGTTTTCT (8) 3.6 0.0036 E16.5 retina GCACTTCTTC (4) 3.6 0.0036 E16.5 retina GCCCAGGAAG (8) 3.6 0.0036 E18.5 retina GAGAAAGTCT (4) 54.6 0.0546 E18.5 retina CTTGGGAACT (2) 16.4 0.0164 E18.5 retina AGTGTTTTCT (8) 3.6 0.0036 E18.5 retina GAGACAGTCT (3) 1.8 0.0018 E18.5 retina GCACTTCTTC (4) 1.8 0.0018 P0.5 retina GAGAAAGTCT (4) 39.3 0.0393 P0.5 retina CTTGGGAACT (2) 15.7 0.0157 P0.5 retina AGTGTTTTCT (8) 5.9 0.0059 P0.5 retina GAGAAAGTTT (5) 2 0.002 P2.5 retina GAGAAAGTCT (4) 47.5 0.0475 P2.5 retina CTTGGGAACT (2) 19.4 0.0194 P2.5 retina AGTGTTTTCT (8) 3.5 0.0035 P2.5 retina AAAATGTGGA (3) 1.8 0.0018 P2.5 retina GAGAAAGTTT (5) 1.8 0.0018 P2.5 retina GGAGCAGGGT (3) 1.8 0.0018 P2.5 retina GGGAAGGGAA (14) 1.8 0.0018 P4.5 retina GAGAAAGTCT (4) 55.5 0.0555 P4.5 retina AGTGTTTTCT (8) 2 0.002 P4.5 retina CTTGGGAACT (2) 2 0.002 P6.5 retina GAGAAAGTCT (4) 21.7 0.0217 P6.5 retina CTTGGGAACT (2) 8.3 0.0083 P6.5 retina GGGAAGGGAA (14) 3.3 0.0033 P6.5 retina GAGAAAGTTT (5) 1.7 0.0017 P10.5 crx- retina GAGAAAGTCT (4) 9.3 0.0093 P10.5 crx- retina CTTGGGAACT (2) 1.9 0.0019 P10.5 crx+ retina GAGAAAGTCT (4) 11.5 0.0115 P10.5 crx+ retina GCACAGGAAG (2) 1.9 0.0019 ONL GAGAAAGTCT (4) 3.8 0.0038 ONL GGGAAGGGAA (14) 3.8 0.0038 ONL CTTGGGAACT (2) 1.9 0.0019 ONL GGTTCAAGCC (3) 1.9 0.0019