Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1782	Rcn2	reticulocalbin 2	9		26611
Gene Ontology	calcium ion binding | endoplasmic reticulum | extracellular space
Human Homolog	RCN2[reticulocalbin 2, EF-hand calcium binding domain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTTGTTA (3) 6.5 0.0065 P8 Cb GC TCTAAACAAT 4.9 0.0049 P8 Cb GC CTGAATTTAA (6) 3.3 0.0033 P8 Cb GC TCCCCTCCAT (6) 1.6 0.0016 P8 Cb GC TCTAAAAAAA (15) 1.6 0.0016 Cb medulloblastoma TCTAAAAAAA (15) 13.9 0.0139 Cb medulloblastoma CTGAATTTAA (6) 4.6 0.0046 P8 GC+1d culture TCTAAAAAAA (15) 6.8 0.0068 P8 GC+1d culture TCTAAACAAT 4.6 0.0046 P8 GC+1d culture GACCAAAAAT (10) 1.1 0.0011 P8 GC+1d culture GGTTTTGTTA (3) 1.1 0.0011 P8 GC+SHH+1d culture TCTAAAAAAA (15) 3.5 0.0035 P8 GC+SHH+1d culture CTGAATTTAA (6) 2.3 0.0023 P8 GC+SHH+1d culture GGTTTTGTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture TCTAAACAAT 2.3 0.0023 3T3 fibroblasts CCGCTGCTGC (2) 10.5 0.0105 E15 cortex GGTTTTGTTA (3) 4.9 0.0049 P1 cortex TCTAAAAAAA (15) 9.1 0.0091 P1 cortex GGTTTTGTTA (3) 4.5 0.0045 P1 cortex TCCCCTCCAT (6) 4.5 0.0045 P1 cortex TCTAAACAAT 4.5 0.0045 Hypothalamus TCTAAAAAAA (15) 10.9 0.0109 Hypothalamus CTGAATTTAA (6) 3.6 0.0036 Hypothalamus CCGCTGCTGC (2) 1.8 0.0018 Hypothalamus GACCAAAAAT (10) 1.8 0.0018 Hypothalamus TCTAAACAAT 1.8 0.0018 E12.5 retina GGTTTTGTTA (3) 3.8 0.0038 E12.5 retina TCTAAAAAAA (15) 3.8 0.0038 E12.5 retina TCTAAACAAT 3.8 0.0038 E12.5 retina GACCAAAAAT (10) 1.9 0.0019 E12.5 retina TCCCCTCCAT (6) 1.9 0.0019 E14.5 retina TCTAAAAAAA (15) 5.5 0.0055 E14.5 retina GACCAAAAAT (10) 3.6 0.0036 E16.5 retina CTGAATTTAA (6) 3.6 0.0036 E16.5 retina GACCAAAAAT (10) 3.6 0.0036 E16.5 retina TCTAAAAAAA (15) 3.6 0.0036 E18.5 retina TCTAAAAAAA (15) 10.9 0.0109 E18.5 retina CTGAATTTAA (6) 1.8 0.0018 E18.5 retina GACCAAAAAT (10) 1.8 0.0018 E18.5 retina TCCCCTCCAT (6) 1.8 0.0018 P0.5 retina GACCAAAAAT (10) 7.9 0.0079 P0.5 retina GGTTTTGTTA (3) 3.9 0.0039 P0.5 retina TCCCCTCCAT (6) 3.9 0.0039 P0.5 retina TCTAAACAAT 3.9 0.0039 P0.5 retina CTGAATTTAA (6) 2 0.002 P0.5 retina TCTAAAAAAA (15) 2 0.002 P0.5 retina TGGTAGCTCT (3) 2 0.002 P2.5 retina GACCAAAAAT (10) 10.6 0.0106 P2.5 retina TCTAAAAAAA (15) 5.3 0.0053 P2.5 retina GGTTTTGTTA (3) 1.8 0.0018 P2.5 retina TCCCCTCCAT (6) 1.8 0.0018 P4.5 retina TCTAAAAAAA (15) 11.9 0.0119 P4.5 retina CTGAATTTAA (6) 5.9 0.0059 P4.5 retina GACCAAAAAT (10) 5.9 0.0059 P6.5 retina TCTAAAAAAA (15) 10 0.01 P6.5 retina TCCCCTCCAT (6) 3.3 0.0033 P6.5 retina GTGCAAAGGA 1.7 0.0017 P10.5 crx- retina TCCCCTCCAT (6) 9.3 0.0093 P10.5 crx- retina GGTTTTGTTA (3) 7.4 0.0074 P10.5 crx- retina GACCAAAAAT (10) 1.9 0.0019 P10.5 crx- retina TCTAAAAAAA (15) 1.9 0.0019 P10.5 crx- retina TCTAAACAAT 1.9 0.0019 P10.5 crx+ retina TCTAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina CCGCTGCTGC (2) 1.9 0.0019 P10.5 crx+ retina CTGAATTTAA (6) 1.9 0.0019 P10.5 crx+ retina GACCAAAAAT (10) 1.9 0.0019 P10.5 crx+ retina GGTTTTGTTA (3) 1.9 0.0019 P10.5 crx+ retina GTGCAAAGGA 1.9 0.0019 P10.5 crx+ retina TGGTAGCTCT (3) 1.9 0.0019 Adult retinal CCGCTGCTGC (2) 3.7 0.0037 Adult retinal CTGAATTTAA (6) 1.9 0.0019 Adult retinal TCCCCTCCAT (6) 1.9 0.0019 Adult retinal TCTAAAAAAA (15) 1.9 0.0019 ONL TCCCCTCCAT (6) 5.7 0.0057 ONL TCTAAAAAAA (15) 3.8 0.0038 ONL TGGTAGCTCT (3) 3.8 0.0038 ONL GACCAAAAAT (10) 1.9 0.0019 ONL GGTTTTGTTA (3) 1.9 0.0019 ONL GTGCAAAGGA 1.9 0.0019 ONL TCTAAACAAT 1.9 0.0019