Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17898	Cirbp	cold inducible RNA binding protein	10	10 C1 (10 44.0 cM)	12696
Gene Ontology	nucleic acid binding | nucleus | RNA binding
Human Homolog	CIRBP[cold inducible RNA binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATACTCCAT 16.3 0.0163 P8 Cb GC TACAAAAAAA (9) 6.5 0.0065 P8 Cb GC GCTTGCTCAA 4.9 0.0049 P8 Cb GC GGTTTTTGTT 4.9 0.0049 Cb medulloblastoma TACAAAAAAA (9) 9.2 0.0092 Cb medulloblastoma CATACTCCAT 4.6 0.0046 P8 GC+1d culture GCTTGCTCAA 8 0.008 P8 GC+1d culture CATACTCCAT 5.7 0.0057 P8 GC+1d culture GGAGGATGGC (4) 4.6 0.0046 P8 GC+1d culture TACAAAAAAA (9) 2.3 0.0023 P8 GC+1d culture GGTTTTTGTT 1.1 0.0011 P8 GC+SHH+1d culture CATACTCCAT 11.7 0.0117 P8 GC+SHH+1d culture GCTTGCTCAA 7 0.007 P8 GC+SHH+1d culture TACAAAAAAA (9) 2.3 0.0023 P8 GC+SHH+1d culture GGAGGATGGC (4) 1.2 0.0012 P8 GC+SHH+1d culture GGTTTTTGTT 1.2 0.0012 3T3 fibroblasts GCTTGCTCAA 3.5 0.0035 E15 cortex CATACTCCAT 4.9 0.0049 P1 cortex CATACTCCAT 9.1 0.0091 P1 cortex GGAGGATGGC (4) 4.5 0.0045 Hypothalamus GCTTGCTCAA 5.4 0.0054 Hypothalamus CATACTCCAT 3.6 0.0036 E12.5 retina CATACTCCAT 11.3 0.0113 E12.5 retina GGAGGATGGC (4) 1.9 0.0019 E14.5 retina CATACTCCAT 3.6 0.0036 E14.5 retina TACAAAAAAA (9) 3.6 0.0036 E14.5 retina GCTGTAATTA (3) 1.8 0.0018 E14.5 retina GCTTGCTCAA 1.8 0.0018 E16.5 retina CATACTCCAT 9.1 0.0091 E16.5 retina GCTGTAATTA (3) 7.2 0.0072 E16.5 retina GCTTGCTCAA 3.6 0.0036 E16.5 retina GGTTTTTGTT 3.6 0.0036 E18.5 retina GCTTGCTCAA 3.6 0.0036 E18.5 retina CATACTCCAT 1.8 0.0018 E18.5 retina GGAGGATGGC (4) 1.8 0.0018 E18.5 retina TACAAAAAAA (9) 1.8 0.0018 P0.5 retina CATACTCCAT 43.2 0.0432 P0.5 retina GCTTGCTCAA 11.8 0.0118 P0.5 retina GGAGGATGGC (4) 7.9 0.0079 P0.5 retina GGTTTTTGTT 7.9 0.0079 P2.5 retina CATACTCCAT 31.7 0.0317 P2.5 retina GCTTGCTCAA 12.3 0.0123 P2.5 retina GGTTTTTGTT 12.3 0.0123 P2.5 retina TACAAAAAAA (9) 5.3 0.0053 P2.5 retina GGAGGATGGC (4) 3.5 0.0035 P2.5 retina TGCCCGATGG 1.8 0.0018 P4.5 retina CATACTCCAT 17.8 0.0178 P4.5 retina GGTTTTTGTT 7.9 0.0079 P4.5 retina TACAAAAAAA (9) 7.9 0.0079 P4.5 retina GGAGGATGGC (4) 4 0.004 P4.5 retina GCTTGCTCAA 2 0.002 P4.5 retina TGCCCGATGG 2 0.002 P6.5 retina CATACTCCAT 40 0.04 P6.5 retina GCTTGCTCAA 13.3 0.0133 P6.5 retina GGTTTTTGTT 10 0.01 P6.5 retina GGAGGATGGC (4) 6.7 0.0067 P6.5 retina TGCCCGATGG 5 0.005 P10.5 crx- retina CATACTCCAT 20.4 0.0204 P10.5 crx- retina GCTTGCTCAA 5.6 0.0056 P10.5 crx- retina GGAGGATGGC (4) 1.9 0.0019 P10.5 crx- retina TACAAAAAAA (9) 1.9 0.0019 P10.5 crx- retina TGCCCGATGG 1.9 0.0019 P10.5 crx+ retina CATACTCCAT 17.3 0.0173 P10.5 crx+ retina GGAGGATGGC (4) 7.7 0.0077 P10.5 crx+ retina GCTTGCTCAA 1.9 0.0019 P10.5 crx+ retina TACAAAAAAA (9) 1.9 0.0019 Adult retinal CATACTCCAT 18.5 0.0185 Adult retinal GGAGGATGGC (4) 11.1 0.0111 Adult retinal GCTTGCTCAA 7.4 0.0074 Adult retinal TACAAAAAAA (9) 1.9 0.0019 Adult retinal TGCCCGATGG 1.9 0.0019 ONL GGTTTTTGTT 13.4 0.0134 ONL CATACTCCAT 9.6 0.0096 ONL GCTTGCTCAA 9.6 0.0096 ONL TACAAAAAAA (9) 3.8 0.0038 ONL GGAGGATGGC (4) 1.9 0.0019