Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17917	Efhd2	EF hand domain containing 2	4	4 69.8 cM	27984
Gene Ontology	calcium ion binding
Human Homolog	EFHD2[EF hand domain containing 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGTTGCTGG (7) 3.3 0.0033 P8 Cb GC TGCTTGCTCA 1.6 0.0016 Cb medulloblastoma TAGTTGCTGG (7) 4.6 0.0046 Cb medulloblastoma GTCCAGCAAG (4) 2.3 0.0023 Cb medulloblastoma TGCTTGCTCA 2.3 0.0023 P8 GC+1d culture TAGTTGCTGG (7) 4.6 0.0046 P8 GC+1d culture TGCTTGCTCA 3.4 0.0034 P8 GC+1d culture GCCTTGGCTT (5) 1.1 0.0011 P8 GC+1d culture GGAACAGAGA (5) 1.1 0.0011 P8 GC+SHH+1d culture TAGTTGCTGG (7) 7 0.007 P8 GC+SHH+1d culture TGCTTGCTCA 2.3 0.0023 3T3 fibroblasts TAGTTGCTGG (7) 3.5 0.0035 E15 cortex TAGTTGCTGG (7) 4.9 0.0049 P1 cortex TAGTTGCTGG (7) 9.1 0.0091 Hypothalamus TAGTTGCTGG (7) 10.9 0.0109 Hypothalamus TGCTTGCTCA 3.6 0.0036 E12.5 retina TAGTTGCTGG (7) 3.8 0.0038 E12.5 retina GTCCAGCAAG (4) 1.9 0.0019 E14.5 retina TAGTTGCTGG (7) 76.5 0.0765 E14.5 retina GGAACAGAGA (5) 1.8 0.0018 E14.5 retina GTCCAGCAAG (4) 1.8 0.0018 E14.5 retina TGCTTGCTCA 1.8 0.0018 E16.5 retina TAGTTGCTGG (7) 36.2 0.0362 E16.5 retina GCCTTGGCTT (5) 1.8 0.0018 E16.5 retina TGCTTGCTCA 1.8 0.0018 E18.5 retina TAGTTGCTGG (7) 7.3 0.0073 E18.5 retina GCCTTGGCTT (5) 1.8 0.0018 P0.5 retina TGCTTGCTCA 5.9 0.0059 P0.5 retina GGAACAGAGA (5) 2 0.002 P0.5 retina TAGTTGCTGG (7) 2 0.002 P2.5 retina TAGTTGCTGG (7) 5.3 0.0053 P4.5 retina TAGTTGCTGG (7) 5.9 0.0059 P6.5 retina GGAACAGAGA (5) 1.7 0.0017 P6.5 retina TAGTTGCTGG (7) 1.7 0.0017 P10.5 crx- retina TAGTTGCTGG (7) 13 0.013 P10.5 crx- retina TGCTTGCTCA 1.9 0.0019 P10.5 crx+ retina TAGTTGCTGG (7) 5.8 0.0058 P10.5 crx+ retina GTCCAGCAAG (4) 1.9 0.0019 Adult retinal TAGTTGCTGG (7) 14.8 0.0148 Adult retinal TGCTTGCTCA 1.9 0.0019 ONL TAGTTGCTGG (7) 19.2 0.0192