Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.17977
A330080J22Rik
RIKEN cDNA A330080J22 gene
9
211586
Mm.17977
1110029I05Rik
RIKEN cDNA 1110029I05 gene
9
319491
Mm.17977
C77901
expressed sequence C77901
9
97519
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCAATTTGT
(
5
)
3.3
0.0033
P8 Cb GC
TTCTTTTCCA
(
4
)
3.3
0.0033
P8 Cb GC
ACGGAAAAAA
(
3
)
1.6
0.0016
P8 Cb GC
TTTTAAAAAA (
26
)
1.6
0.0016
Cb medulloblastoma
TTTTAAAAAA (
26
)
9.2
0.0092
Cb medulloblastoma
CAGAAACAGA (
8
)
2.3
0.0023
Cb medulloblastoma
TAGCCCAAGC
(
5
)
2.3
0.0023
P8 GC+1d culture
AAGCACACAT
(
4
)
2.3
0.0023
P8 GC+1d culture
GCCACCAGCC
(
8
)
2.3
0.0023
P8 GC+1d culture
TTTTAAAAAA (
26
)
2.3
0.0023
P8 GC+1d culture
ACGGAAAAAA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTAAAAAA (
26
)
10.5
0.0105
P8 GC+SHH+1d culture
AAGCACACAT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCAATTTGT
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGTCCAGAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCTTTTCCA
(
4
)
1.2
0.0012
3T3 fibroblasts
GCCACCAGCC
(
8
)
3.5
0.0035
E15 cortex
CAGAAACAGA (
8
)
4.9
0.0049
P1 cortex
TTTTAAAAAA (
26
)
4.5
0.0045
Hypothalamus
TTTTAAAAAA (
26
)
1.8
0.0018
E12.5 retina
TGTGCACATA
(
5
)
1.9
0.0019
E12.5 retina
TTCTTTTCCA
(
4
)
1.9
0.0019
E12.5 retina
TTTTAAAAAA (
26
)
1.9
0.0019
E14.5 retina
TTCTTTTCCA
(
4
)
5.5
0.0055
E14.5 retina
TTTTAAAAAA (
26
)
3.6
0.0036
E14.5 retina
TAGCCCAAGC
(
5
)
1.8
0.0018
E14.5 retina
TGTGTCTTTA (
7
)
1.8
0.0018
E16.5 retina
ACGGAAAAAA
(
3
)
1.8
0.0018
E16.5 retina
TGCAATTTGT
(
5
)
1.8
0.0018
E18.5 retina
TTTTAAAAAA (
26
)
9.1
0.0091
E18.5 retina
TGCAATTTGT
(
5
)
1.8
0.0018
P0.5 retina
GTGTCCAGAG
(
3
)
2
0.002
P0.5 retina
TGTGTCTTTA (
7
)
2
0.002
P2.5 retina
TTTTAAAAAA (
26
)
5.3
0.0053
P2.5 retina
GTGTCCAGAG
(
3
)
1.8
0.0018
P2.5 retina
TGCAATTTGT
(
5
)
1.8
0.0018
P2.5 retina
TGTGTCTTTA (
7
)
1.8
0.0018
P2.5 retina
TTCTTTTCCA
(
4
)
1.8
0.0018
P4.5 retina
TTTTAAAAAA (
26
)
4
0.004
P4.5 retina
CAGAAACAGA (
8
)
2
0.002
P6.5 retina
TTTTAAAAAA (
26
)
5
0.005
P6.5 retina
CAGAAACAGA (
8
)
1.7
0.0017
P6.5 retina
TAGCCCAAGC
(
5
)
1.7
0.0017
P10.5 crx- retina
TAGCCCAAGC
(
5
)
3.7
0.0037
P10.5 crx- retina
CAGAAACAGA (
8
)
1.9
0.0019
P10.5 crx- retina
TGTGCACATA
(
5
)
1.9
0.0019
P10.5 crx- retina
TTCTTTTCCA
(
4
)
1.9
0.0019
P10.5 crx- retina
TTTTAAAAAA (
26
)
1.9
0.0019
P10.5 crx+ retina
ACGGAAAAAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TTTTAAAAAA (
26
)
1.9
0.0019
ONL
TGTGCACATA
(
5
)
3.8
0.0038
ONL
TTTTAAAAAA (
26
)
3.8
0.0038
