Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.180763
Rap1ga1
Rap1, GTPase-activating protein 1
4
4 66.3 cM
110351
Human Homolog
RAP1GA1[RAP1, GTPase activating protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGCCCAGGG (
4
)
3.3
0.0033
Cb medulloblastoma
AGGCCCAGGG (
4
)
13.9
0.0139
Cb medulloblastoma
TATGTCAGTA
(
4
)
9.2
0.0092
P8 GC+1d culture
AGGCCCAGGG (
4
)
2.3
0.0023
P8 GC+1d culture
TCTCACAAGG (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AGGCCCAGGG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTCACAAGG (
2
)
1.2
0.0012
3T3 fibroblasts
AGGCCCAGGG (
4
)
3.5
0.0035
P1 cortex
AGGCCCAGGG (
4
)
9.1
0.0091
Hypothalamus
TATGTCAGTA
(
4
)
14.5
0.0145
Hypothalamus
AGGCCCAGGG (
4
)
3.6
0.0036
Hypothalamus
GCTCACAGCA
(
3
)
3.6
0.0036
E12.5 retina
AGGCCCAGGG (
4
)
1.9
0.0019
E14.5 retina
TATGTCAGTA
(
4
)
5.5
0.0055
E14.5 retina
AGGCCCAGGG (
4
)
1.8
0.0018
E16.5 retina
TATGTCAGTA
(
4
)
14.5
0.0145
E16.5 retina
AGGCCCAGGG (
4
)
7.2
0.0072
E16.5 retina
TCTCACAAGG (
2
)
3.6
0.0036
E16.5 retina
GCAAAACCAA (
7
)
1.8
0.0018
E18.5 retina
TATGTCAGTA
(
4
)
12.7
0.0127
E18.5 retina
AGGCCCAGGG (
4
)
1.8
0.0018
E18.5 retina
TCTCACAAGG (
2
)
1.8
0.0018
P0.5 retina
TATGTCAGTA
(
4
)
3.9
0.0039
P0.5 retina
TCTCACAAGG (
2
)
2
0.002
P2.5 retina
TATGTCAGTA
(
4
)
21.1
0.0211
P2.5 retina
AGGCCCAGGG (
4
)
5.3
0.0053
P4.5 retina
TATGTCAGTA
(
4
)
11.9
0.0119
P4.5 retina
AGGCCCAGGG (
4
)
4
0.004
P6.5 retina
AGGCCCAGGG (
4
)
6.7
0.0067
P6.5 retina
TATGTCAGTA
(
4
)
6.7
0.0067
P6.5 retina
TCTCACAAGG (
2
)
3.3
0.0033
P10.5 crx- retina
TATGTCAGTA
(
4
)
11.1
0.0111
P10.5 crx- retina
AGGCCCAGGG (
4
)
5.6
0.0056
P10.5 crx- retina
GCTCACAGCA
(
3
)
1.9
0.0019
P10.5 crx- retina
TCTCACAAGG (
2
)
1.9
0.0019
P10.5 crx+ retina
TATGTCAGTA
(
4
)
9.6
0.0096
P10.5 crx+ retina
AGGCCCAGGG (
4
)
7.7
0.0077
P10.5 crx+ retina
TCTCACAAGG (
2
)
5.8
0.0058
Adult retinal
TATGTCAGTA
(
4
)
5.6
0.0056
Adult retinal
GCAAAACCAA (
7
)
1.9
0.0019
Adult retinal
TCTCACAAGG (
2
)
1.9
0.0019
ONL
TATGTCAGTA
(
4
)
5.7
0.0057
ONL
TCTCACAAGG (
2
)
3.8
0.0038
ONL
GCAAAACCAA (
7
)
1.9
0.0019
