Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180873	Rpl18a	Ribosomal protein L18A	8		76808
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL18A[ribosomal protein L18a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTGGAAG (5) 94.6 0.0946 P8 Cb GC GAGGTGGAAG (6) 8.2 0.0082 P8 Cb GC TTGTGTGTGC 4.9 0.0049 P8 Cb GC TATCGGGAGT 3.3 0.0033 P8 Cb GC GGTGCCCGAC 1.6 0.0016 P8 Cb GC TAGGTGGAAG 1.6 0.0016 Cb medulloblastoma AAGGTGGAAG (5) 27.7 0.0277 Cb medulloblastoma TGGTGGCCAA (7) 4.6 0.0046 Cb medulloblastoma AAGGTGGAAA (2) 2.3 0.0023 Cb medulloblastoma AAGGTGGGAG (4) 2.3 0.0023 P8 GC+1d culture AAGGTGGAAG (5) 97 0.097 P8 GC+1d culture GAGGTGGAAG (6) 9.1 0.0091 P8 GC+1d culture GGTGCCCGAC 3.4 0.0034 P8 GC+1d culture TTGTGTGTGC 3.4 0.0034 P8 GC+1d culture AAGGTGGGAG (4) 1.1 0.0011 P8 GC+SHH+1d culture AAGGTGGAAG (5) 92.5 0.0925 P8 GC+SHH+1d culture GAGGTGGAAG (6) 11.7 0.0117 P8 GC+SHH+1d culture TTGTGTGTGC 7 0.007 P8 GC+SHH+1d culture AAGGTGGAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGTGCCCGAC 1.2 0.0012 P8 GC+SHH+1d culture TAGGTGGAAG 1.2 0.0012 P8 GC+SHH+1d culture TGGTGGCCAA (7) 1.2 0.0012 3T3 fibroblasts AAGGTGGAAG (5) 101.6 0.1016 3T3 fibroblasts GAGGTGGAAG (6) 3.5 0.0035 3T3 fibroblasts TAGGTGGAAG 3.5 0.0035 E15 cortex AAGGTGGAAG (5) 39.6 0.0396 E15 cortex GGTGCCCGAC 14.8 0.0148 E15 cortex GAGGTGGAAG (6) 9.9 0.0099 E15 cortex AAGGTGGGAG (4) 4.9 0.0049 P1 cortex AAGGTGGAAG (5) 31.8 0.0318 Hypothalamus AAGGTGGAAG (5) 23.5 0.0235 Hypothalamus GAGGTGGAAG (6) 3.6 0.0036 Hypothalamus TGGTGGCCAA (7) 3.6 0.0036 Hypothalamus TTGTGTGTGC 3.6 0.0036 Hypothalamus AAGGTGGAAA (2) 1.8 0.0018 E12.5 retina AAGGTGGAAG (5) 200.9 0.2009 E12.5 retina GAGGTGGAAG (6) 7.5 0.0075 E12.5 retina AAGGTGGAAA (2) 5.6 0.0056 E12.5 retina ATCTGGATGG (2) 5.6 0.0056 E12.5 retina TGCACACATA (16) 5.6 0.0056 E12.5 retina TATCGGGAGT 3.8 0.0038 E12.5 retina TTGTGTGTGC 3.8 0.0038 E12.5 retina AAAGTGGAAG (3) 1.9 0.0019 E14.5 retina AAGGTGGAAG (5) 63.8 0.0638 E14.5 retina TTGTGTGTGC 12.8 0.0128 E14.5 retina TGGTGGCCAA (7) 3.6 0.0036 E14.5 retina TGCACACATA (16) 1.8 0.0018 E16.5 retina AAGGTGGAAG (5) 108.7 0.1087 E16.5 retina TTGTGTGTGC 7.2 0.0072 E16.5 retina TGGTGGCCAA (7) 5.4 0.0054 E16.5 retina GAGGTGGAAG (6) 3.6 0.0036 E16.5 retina GGTGCCCGAC 1.8 0.0018 E18.5 retina AAGGTGGAAG (5) 47.3 0.0473 E18.5 retina GAGGTGGAAG (6) 9.1 0.0091 E18.5 retina TGGTGGCCAA (7) 3.6 0.0036 E18.5 retina TTGTGTGTGC 3.6 0.0036 E18.5 retina ATCTGGATGG (2) 1.8 0.0018 P0.5 retina AAGGTGGAAG (5) 96.2 0.0962 P0.5 retina GAGGTGGAAG (6) 9.8 0.0098 P0.5 retina TTGTGTGTGC 3.9 0.0039 P0.5 retina AAGGTGGGAG (4) 2 0.002 P0.5 retina ATCTGGATGG (2) 2 0.002 P0.5 retina TGGTGGCCAA (7) 2 0.002 P2.5 retina AAGGTGGAAG (5) 58.1 0.0581 P2.5 retina GAGGTGGAAG (6) 12.3 0.0123 P2.5 retina TAGGTGGAAG 1.8 0.0018 P2.5 retina TTGTGTGTGC 1.8 0.0018 P4.5 retina AAGGTGGAAG (5) 43.6 0.0436 P4.5 retina GAGGTGGAAG (6) 5.9 0.0059 P4.5 retina AAGGTGGAAA (2) 2 0.002 P4.5 retina ATCTGGATGG (2) 2 0.002 P4.5 retina GGTGCCCGAC 2 0.002 P4.5 retina TGGTGGCCAA (7) 2 0.002 P6.5 retina AAGGTGGAAG (5) 48.4 0.0484 P6.5 retina GAGGTGGAAG (6) 3.3 0.0033 P6.5 retina TGCACACATA (16) 1.7 0.0017 P10.5 crx- retina AAGGTGGAAG (5) 157.9 0.1579 P10.5 crx- retina TGGTGGCCAA (7) 3.7 0.0037 P10.5 crx- retina AAGGTGGAAA (2) 1.9 0.0019 P10.5 crx- retina TATCGGGAGT 1.9 0.0019 P10.5 crx- retina TGCACACATA (16) 1.9 0.0019 P10.5 crx- retina TTGTGTGTGC 1.9 0.0019 P10.5 crx+ retina AAGGTGGAAG (5) 57.7 0.0577 P10.5 crx+ retina TTGTGTGTGC 3.8 0.0038 P10.5 crx+ retina ATCTGGATGG (2) 1.9 0.0019 P10.5 crx+ retina GGTGCCCGAC 1.9 0.0019 Adult retinal AAGGTGGAAG (5) 18.5 0.0185 Adult retinal AAAGTGGAAG (3) 3.7 0.0037 Adult retinal GAGGTGGAAG (6) 3.7 0.0037 Adult retinal TGCACACATA (16) 1.9 0.0019 ONL AAGGTGGAAG (5) 49.8 0.0498 ONL TTGTGTGTGC 7.7 0.0077