Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.181610
6330577E15Rik
RIKEN cDNA 6330577E15 gene
19
67788
Human Homolog
C10orf78[chromosome 10 open reading frame 78]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCTCTGTTC
(
3
)
8.2
0.0082
P8 Cb GC
GCTGAGGAAG
(
3
)
6.5
0.0065
P8 Cb GC
GAAAAAAATA (
16
)
1.6
0.0016
P8 Cb GC
GTGGCTCTGT (
8
)
1.6
0.0016
P8 Cb GC
TACTAAAATG
(
2
)
1.6
0.0016
P8 Cb GC
TCTGTTTGTT
(
4
)
1.6
0.0016
Cb medulloblastoma
GCTGAGGAAG
(
3
)
9.2
0.0092
Cb medulloblastoma
GTGGCTCTGT (
8
)
4.6
0.0046
Cb medulloblastoma
TGCTCTGTTC
(
3
)
2.3
0.0023
P8 GC+1d culture
GCTGAGGAAG
(
3
)
4.6
0.0046
P8 GC+1d culture
TGCTCTGTTC
(
3
)
4.6
0.0046
P8 GC+1d culture
GTGGCTCTGT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTGAGGAAG
(
3
)
7
0.007
P8 GC+SHH+1d culture
GTGGCTCTGT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTTGAGAAT
1.2
0.0012
P8 GC+SHH+1d culture
TGCTCTGTTC
(
3
)
1.2
0.0012
3T3 fibroblasts
TGCTCTGTTC
(
3
)
14
0.014
3T3 fibroblasts
GCTGAGGAAG
(
3
)
10.5
0.0105
3T3 fibroblasts
GTGGCTCTGT (
8
)
3.5
0.0035
E15 cortex
TGCTCTGTTC
(
3
)
14.8
0.0148
E15 cortex
GCTGAGGAAG
(
3
)
4.9
0.0049
E15 cortex
GTGGCTCTGT (
8
)
4.9
0.0049
P1 cortex
GCTGAGGAAG
(
3
)
4.5
0.0045
Hypothalamus
TGCTCTGTTC
(
3
)
3.6
0.0036
E12.5 retina
GCTGAGGAAG
(
3
)
9.4
0.0094
E12.5 retina
TGCTCTGTTC
(
3
)
7.5
0.0075
E12.5 retina
CTTTGAGAAT
3.8
0.0038
E14.5 retina
GCTGAGGAAG
(
3
)
5.5
0.0055
E16.5 retina
TGCTCTGTTC
(
3
)
7.2
0.0072
E16.5 retina
GCTGAGGAAG
(
3
)
5.4
0.0054
E16.5 retina
TACTAAAATG
(
2
)
3.6
0.0036
E16.5 retina
GAAAAAAATA (
16
)
1.8
0.0018
E16.5 retina
TCTGTTTGTT
(
4
)
1.8
0.0018
E18.5 retina
GCTGAGGAAG
(
3
)
5.5
0.0055
E18.5 retina
TGCTCTGTTC
(
3
)
5.5
0.0055
E18.5 retina
GAAAAAAATA (
16
)
1.8
0.0018
E18.5 retina
TACTAAAATG
(
2
)
1.8
0.0018
P0.5 retina
TGCTCTGTTC
(
3
)
5.9
0.0059
P0.5 retina
GCTGAGGAAG
(
3
)
3.9
0.0039
P0.5 retina
GTGGCTCTGT (
8
)
2
0.002
P2.5 retina
GCTGAGGAAG
(
3
)
3.5
0.0035
P2.5 retina
GTGGCTCTGT (
8
)
1.8
0.0018
P2.5 retina
TCTGTTTGTT
(
4
)
1.8
0.0018
P4.5 retina
GTGGCTCTGT (
8
)
4
0.004
P4.5 retina
GCTGAGGAAG
(
3
)
2
0.002
P6.5 retina
GCTGAGGAAG
(
3
)
11.7
0.0117
P6.5 retina
GTGGCTCTGT (
8
)
3.3
0.0033
P10.5 crx- retina
GCTGAGGAAG
(
3
)
11.1
0.0111
P10.5 crx- retina
TGCTCTGTTC
(
3
)
11.1
0.0111
P10.5 crx- retina
TACTAAAATG
(
2
)
3.7
0.0037
P10.5 crx- retina
GTGGCTCTGT (
8
)
1.9
0.0019
P10.5 crx+ retina
GTGGCTCTGT (
8
)
9.6
0.0096
P10.5 crx+ retina
TGCTCTGTTC
(
3
)
3.8
0.0038
P10.5 crx+ retina
GCTGAGGAAG
(
3
)
1.9
0.0019
Adult retinal
TACTAAAATG
(
2
)
1.9
0.0019
Adult retinal
TGCTCTGTTC
(
3
)
1.9
0.0019
ONL
TGCTCTGTTC
(
3
)
3.8
0.0038
ONL
GTGGCTCTGT (
8
)
1.9
0.0019
