Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181862	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	18		15531
Gene Ontology	[heparan sulfate]-glucosamine N-sulfotransferase activity | cysteine-type endopeptidase activity | Golgi apparatus | integral to membrane | organogenesis | polysaccharide biosynthesis | protein amino acid deacetylation | protein amino acid sulfation | protein amino acid sulfation | proteolysis and peptidolysis | respiratory gaseous exchange | sulfotransferase activity | transferase activity
Human Homolog	NDST1[N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTGGAGG 9.8 0.0098 P8 Cb GC TTCCTCCCTC (6) 4.9 0.0049 P8 Cb GC CAGTGCTGGG (2) 1.6 0.0016 P8 Cb GC CTACCTAGCT 1.6 0.0016 P8 Cb GC GCAGTCAGCA (3) 1.6 0.0016 P8 Cb GC GGGACAACCA (7) 1.6 0.0016 Cb medulloblastoma GTTTTGGTGT (2) 2.3 0.0023 P8 GC+1d culture CTACCTAGCT 11.4 0.0114 P8 GC+1d culture TTCCTCCCTC (6) 9.1 0.0091 P8 GC+1d culture GGGACAACCA (7) 4.6 0.0046 P8 GC+1d culture AGACTATTTA (2) 1.1 0.0011 P8 GC+SHH+1d culture CTACCTAGCT 16.4 0.0164 P8 GC+SHH+1d culture AGACTATTTA (2) 3.5 0.0035 P8 GC+SHH+1d culture AAGGTGGAGG 1.2 0.0012 P8 GC+SHH+1d culture GCAGTCAGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGACAACCA (7) 1.2 0.0012 3T3 fibroblasts CTACCTAGCT 3.5 0.0035 P1 cortex TTCCTCCCTC (6) 4.5 0.0045 Hypothalamus CTACCTAGCT 3.6 0.0036 Hypothalamus CAGTGCTGGG (2) 1.8 0.0018 Hypothalamus GCAGTCAGCA (3) 1.8 0.0018 Hypothalamus TTCCTCCCTC (6) 1.8 0.0018 E12.5 retina AAGGTGGAGG 3.8 0.0038 E14.5 retina TTCCTCCCTC (6) 1.8 0.0018 E16.5 retina CAGTGCTGGG (2) 3.6 0.0036 E16.5 retina CTACCTAGCT 3.6 0.0036 E16.5 retina AGACTATTTA (2) 1.8 0.0018 E16.5 retina TTCCTCCCTC (6) 1.8 0.0018 E18.5 retina CTACCTAGCT 1.8 0.0018 P0.5 retina TTCCTCCCTC (6) 5.9 0.0059 P0.5 retina CTACCTAGCT 3.9 0.0039 P0.5 retina GTTTTGGTGT (2) 2 0.002 P2.5 retina CTACCTAGCT 5.3 0.0053 P2.5 retina TTCCTCCCTC (6) 5.3 0.0053 P2.5 retina GGGACAACCA (7) 1.8 0.0018 P4.5 retina CTACCTAGCT 4 0.004 P4.5 retina GTTTTGGTGT (2) 2 0.002 P4.5 retina TTCCTCCCTC (6) 2 0.002 P6.5 retina CTACCTAGCT 10 0.01 P6.5 retina TTCCTCCCTC (6) 6.7 0.0067 P6.5 retina AAGGTGGAGG 3.3 0.0033 P6.5 retina CAGTGCTGGG (2) 3.3 0.0033 P10.5 crx+ retina GCAGTCAGCA (3) 3.8 0.0038 P10.5 crx+ retina AAGGTGGAGG 1.9 0.0019 P10.5 crx+ retina CTACCTAGCT 1.9 0.0019 P10.5 crx+ retina GGGACAACCA (7) 1.9 0.0019 Adult retinal CTACCTAGCT 5.6 0.0056 Adult retinal TTCCTCCCTC (6) 3.7 0.0037 Adult retinal CAGTGCTGGG (2) 1.9 0.0019 Adult retinal GGGACAACCA (7) 1.9 0.0019 ONL CTACCTAGCT 1.9 0.0019 ONL GCAGTCAGCA (3) 1.9 0.0019